RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 PPP1R14DQ9NXH3 145 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 U3KQE9 123 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 NIPBLQ6KC79 2804 aaeCLIP11.98□□□□□ -0.49
TVP23C-203ENST00000428082 IGHV3-35A0A0C4DH35 117 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 hDV102S1A0JD36 115 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 TCF21O43680 179 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 HLA-DMBP28068 263 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 C12orf54Q6X4T0 127 aa11.98□□□□□ -0.49
TVP23C-203ENST00000428082 LOC389332A0A1B0GUA5 103 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 LGALS9BQ3B8N2 356 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 IGFL4Q6B9Z1 124 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 LGALS9CQ6DKI2 356 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 Q6ZSV7 163 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 Q8N2B8 174 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
TVP23C-203ENST00000428082 TIMM8BQ9Y5J9 83 aaPredicted RBP11.97□□□□□ -0.49
TVP23C-203ENST00000428082 IGHV3OR16-8A0A075B7F1 116 aa11.96□□□□□ -0.49
TVP23C-203ENST00000428082 H0Y8G0 127 aa11.96□□□□□ -0.49
TVP23C-203ENST00000428082 H3BUA1 57 aa11.96□□□□□ -0.49
TVP23C-203ENST00000428082 BRI3O95415 125 aa11.96□□□□□ -0.49
TVP23C-203ENST00000428082 PRB4P10163 310 aaPredicted RBP11.96□□□□□ -0.49
TVP23C-203ENST00000428082 PSMG4Q5JS54 123 aa11.96□□□□□ -0.49
TVP23C-203ENST00000428082 ERCC8Q13216 396 aa11.96□□□□□ -0.5
TVP23C-203ENST00000428082 SMIM15Q7Z3B0 74 aa11.96□□□□□ -0.5
TVP23C-203ENST00000428082 OR1N2Q8NGR9 330 aa11.96□□□□□ -0.5
TVP23C-203ENST00000428082 LENEPQ9Y5L5 61 aa11.96□□□□□ -0.5
TVP23C-203ENST00000428082 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
TVP23C-203ENST00000428082 C9orf47Q6ZRZ4 202 aa11.95□□□□□ -0.5
TVP23C-203ENST00000428082 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
TVP23C-203ENST00000428082 NXT2Q9NPJ8 142 aaKnown RBP11.95□□□□□ -0.5
TVP23C-203ENST00000428082 LINC01546A6NGU7 62 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 PRAC2D3DTV9 90 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 AGPAT4-IT1Q9H0P7 198 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 ZNF580Q9UK33 172 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 COX11Q9Y6N1 276 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 TRGV3P03979 118 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 NPSP0C0P6 89 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 COX8AP10176 69 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 CFHR3Q02985 330 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 RNF182Q8N6D2 247 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 OR8A1Q8NGG7 326 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
TVP23C-203ENST00000428082 A0A096LNJ9 63 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 NPYP01303 97 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 ARL3P36405 182 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 CACNG7P62955 275 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 C10orf99Q6UWK7 81 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
TVP23C-203ENST00000428082 IGHV3-66A0A0C4DH42 116 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 NDUFA4O00483 81 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 C16orf92Q96LL3 132 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 MUC21A0A0G2JKD1 596 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 MUC21A0A140T8X8 626 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 MUC21Q5SSG8 566 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
TVP23C-203ENST00000428082 JMJD1CQ15652 2540 aa11.91□□□□□ -0.5
TVP23C-203ENST00000428082 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
TVP23C-203ENST00000428082 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
TVP23C-203ENST00000428082 GLMPQ8WWB7 406 aa11.91□□□□□ -0.5
TVP23C-203ENST00000428082 C2CD3Q4AC94 2353 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 OVOL1O14753 267 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 NUDT3O95989 172 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 MPV17L2Q567V2 206 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 BVES-AS1Q5T3Y7 98 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 LCNL1Q6ZST4 164 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 LINC00477Q96M19 166 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 KLK15Q9H2R5 256 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
TVP23C-203ENST00000428082 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 SMKR1H3BMG3 65 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 TNFRSF6BO95407 300 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 PF4V1P10720 104 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 FCER1GP30273 86 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 LINC01006Q8NI28 216 aa11.9□□□□□ -0.51
TVP23C-203ENST00000428082 NCR2O95944 276 aa11.89□□□□□ -0.51
TVP23C-203ENST00000428082 MCRIP2Q9BUT9 160 aaKnown RBP11.89□□□□□ -0.51
TVP23C-203ENST00000428082 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
TVP23C-203ENST00000428082 IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 ZNF207O43670 478 aaKnown RBP11.88□□□□□ -0.51
TVP23C-203ENST00000428082 NDUFA7O95182 113 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 PSMB8P28062 276 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 DEFB125Q8N687 156 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 MSRB1Q9NZV6 116 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 IGHV3-49A0A0A0MS15 119 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 PRSS47A8MTI9 375 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 SNAI2O43623 268 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 Q8N8P6 123 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 OR10J6PQ8NGY7 276 aa11.88□□□□□ -0.51
TVP23C-203ENST00000428082 A0A0G2JLM5 398 aa11.87□□□□□ -0.51
TVP23C-203ENST00000428082 SIVA1O15304 175 aa11.87□□□□□ -0.51
TVP23C-203ENST00000428082 OR9G4Q8NGQ1 327 aa11.87□□□□□ -0.51
TVP23C-203ENST00000428082 SMPXQ9UHP9 88 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms