RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 V9GYV3 84 aa11.32□□□□□ -0.6
CLK3P2-201ENST00000427566 CSMD3Q7Z407 3707 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 LCE6AA0A183 80 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 GNG5P63218 68 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 OR5I1Q13606 314 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 CMTM2Q8TAZ6 248 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
CLK3P2-201ENST00000427566 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 PHOX2AO14813 284 aa11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 CDKN1BP46527 198 aa11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 RPL19P84098 196 aaKnown RBP11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 PHLDA1Q8WV24 401 aaPredicted RBP11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 LINC00479Q96M42 142 aa11.3□□□□□ -0.6
CLK3P2-201ENST00000427566 STARD9Q9P2P6 4700 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 CSN1S1P47710 185 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 Q8TAT8 98 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BHQ93079 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BNQ99877 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 HIST1H2BMQ99879 126 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 TMEM208Q9BTX3 173 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 KLK5Q9Y337 293 aaPredicted RBP11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 GOLT1BQ9Y3E0 138 aa11.29□□□□□ -0.6
CLK3P2-201ENST00000427566 TENM2Q9NT68 2774 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 KMT2CQ8NEZ4 4911 aaKnown RBP11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 TRAV34A0A0B4J273 112 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 INSP01308 110 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 AMBPP02760 352 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 EMP1P54849 157 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 FRZBQ92765 325 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 LINC00477Q96M19 166 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
CLK3P2-201ENST00000427566 K7EQM0 130 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 LTAP01374 205 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 TRGC1P0CF51 173 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 FABP9Q0Z7S8 132 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 Q6ZQT7 251 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 ZNF492Q9P255 531 aa11.27□□□□□ -0.6
CLK3P2-201ENST00000427566 TRAV8-1A0A0A6YYK1 113 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 ZNF705GA8MUZ8 300 aaPredicted RBP11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 COX19Q49B96 90 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 TMEM78Q5T7P6 136 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 PRR9Q5T870 116 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 SGK494Q96LW2 274 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 NEU1Q99519 415 aa11.26□□□□□ -0.61
CLK3P2-201ENST00000427566 TRAV12-3A0A0B4J271 114 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 GATCO43716 136 aaKnown RBP11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 HOXA5P20719 270 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 TSPOP30536 169 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 LEPP41159 167 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 ZNF138P52744 262 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 NDUFA6P56556 154 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 SMUG1Q53HV7 270 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 Q86TA4 180 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 SMIM27A0A1W2PRY6 76 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 KLLNB2CW77 178 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 HTN1P15515 57 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 AZU1P20160 251 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 AKR1D1P51857 326 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 NHLRC2Q8NBF2 726 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 LINC01587Q99440 93 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 ZFP30Q9Y2G7 519 aa11.25□□□□□ -0.61
CLK3P2-201ENST00000427566 S100A8P05109 93 aa11.24□□□□□ -0.61
CLK3P2-201ENST00000427566 CRISP2P16562 243 aa11.24□□□□□ -0.61
CLK3P2-201ENST00000427566 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
CLK3P2-201ENST00000427566 LY6G6CO95867 125 aa11.23□□□□□ -0.61
CLK3P2-201ENST00000427566 IGLV2-11P01706 119 aa11.23□□□□□ -0.61
CLK3P2-201ENST00000427566 GPX1P07203 203 aa11.23□□□□□ -0.61
CLK3P2-201ENST00000427566 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
CLK3P2-201ENST00000427566 CT83Q5H943 113 aa11.23□□□□□ -0.61
CLK3P2-201ENST00000427566 Q6ZTC4 211 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms