RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CMTM2Q8TAZ6 248 aa13.3□□□□□ -0.28
COL9A2-204ENST00000427563 FAM3BP58499 235 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-204ENST00000427563 LINC00336Q6ZUF6 198 aa13.29□□□□□ -0.28
COL9A2-204ENST00000427563 SGK494Q96LW2 274 aa13.29□□□□□ -0.28
COL9A2-204ENST00000427563 ATG101Q9BSB4 218 aa13.29□□□□□ -0.28
COL9A2-204ENST00000427563 DNAH11Q96DT5 4516 aa13.28□□□□□ -0.28
COL9A2-204ENST00000427563 TRGV2A0A075B6R0 118 aa13.28□□□□□ -0.28
COL9A2-204ENST00000427563 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
COL9A2-204ENST00000427563 GGTLC3B5MD39 225 aa13.28□□□□□ -0.28
COL9A2-204ENST00000427563 F6UZH7 168 aa13.28□□□□□ -0.28
COL9A2-204ENST00000427563 KRTAP17-1Q9BYP8 105 aa13.28□□□□□ -0.28
COL9A2-204ENST00000427563 H3BNG1 76 aa13.27□□□□□ -0.29
COL9A2-204ENST00000427563 UBE2G2P60604 165 aa13.27□□□□□ -0.29
COL9A2-204ENST00000427563 BLOC1S1P78537 153 aa13.27□□□□□ -0.29
COL9A2-204ENST00000427563 CCL20P78556 96 aa13.27□□□□□ -0.29
COL9A2-204ENST00000427563 A0A096LPF7 62 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 FAM74A7A6NL05 159 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 TEX46H3BTG2 121 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 IFNA7P01567 189 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 IGHV3-53P01767 116 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 TCRAP04437 139 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 ZNF415Q09FC8 603 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 ESRGQ1W209 222 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 TDRG1Q3Y452 100 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 TMEM183AQ8IXX5 376 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
COL9A2-204ENST00000427563 GNRH2O43555 120 aa13.25□□□□□ -0.29
COL9A2-204ENST00000427563 ZNF80P51504 273 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-204ENST00000427563 CCL18P55774 89 aa13.25□□□□□ -0.29
COL9A2-204ENST00000427563 C5orf17Q8NAS9 161 aa13.25□□□□□ -0.29
COL9A2-204ENST00000427563 C8orf49Q96NF6 230 aa13.25□□□□□ -0.29
COL9A2-204ENST00000427563 NBDYA0A0U1RRE5 68 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 PPT1P50897 306 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 SUMO1P63165 101 aaKnown RBP13.24□□□□□ -0.29
COL9A2-204ENST00000427563 FHL2Q14192 279 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 NAGKQ9UJ70 344 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 KIAA1109Q2LD37 5005 aa13.24□□□□□ -0.29
COL9A2-204ENST00000427563 PAGE4O60829 102 aa13.23□□□□□ -0.29
COL9A2-204ENST00000427563 FAM159AQ6UWV7 190 aa13.23□□□□□ -0.29
COL9A2-204ENST00000427563 LYPD6BQ8NI32 183 aa13.23□□□□□ -0.29
COL9A2-204ENST00000427563 KRTAP1-5Q9BYS1 174 aa13.23□□□□□ -0.29
COL9A2-204ENST00000427563 NKX6-2Q9C056 277 aaPredicted RBP13.23□□□□□ -0.29
COL9A2-204ENST00000427563 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
COL9A2-204ENST00000427563 TRAV21A0A0B4J279 112 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 TYMSP04818 313 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 C1orf134Q5TEV5 83 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 CST9LP1Q5W188 147 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 GNG13Q9P2W3 67 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
COL9A2-204ENST00000427563 TRGV11A0A075B6L2 103 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 SERTM2A0A1B0GWG4 89 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 SFTA3P0C7M3 94 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 IFITM2Q01629 132 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 PCNPQ8WW12 178 aaKnown RBP13.21□□□□□ -0.29
COL9A2-204ENST00000427563 RASL10AQ92737 203 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 ZNF479Q96JC4 524 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 LINC00479Q96M42 142 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 UPK3BQ9BT76 320 aa13.21□□□□□ -0.29
COL9A2-204ENST00000427563 CRYBA4P53673 196 aa13.2□□□□□ -0.3
COL9A2-204ENST00000427563 SPXQ9BT56 116 aa13.2□□□□□ -0.3
COL9A2-204ENST00000427563 Q9H8V8 135 aa13.2□□□□□ -0.3
COL9A2-204ENST00000427563 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
COL9A2-204ENST00000427563 FLI1Q01543 452 aaPredicted RBP13.19□□□□□ -0.3
COL9A2-204ENST00000427563 CYB561D1Q8N8Q1 229 aa13.19□□□□□ -0.3
COL9A2-204ENST00000427563 TMEM75Q8N9X5 138 aa13.19□□□□□ -0.3
COL9A2-204ENST00000427563 TRAV34A0A0B4J273 112 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 PAX4O43316 350 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 IFNA1P01562 189 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 BCL2P10415 239 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 PRO0255Q9UI72 69 aa13.18□□□□□ -0.3
COL9A2-204ENST00000427563 PEX7O00628 323 aa13.17□□□□□ -0.3
COL9A2-204ENST00000427563 GCGP01275 180 aa13.17□□□□□ -0.3
COL9A2-204ENST00000427563 TNP2Q05952 138 aa13.17□□□□□ -0.3
COL9A2-204ENST00000427563 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
COL9A2-204ENST00000427563 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
COL9A2-204ENST00000427563 M0R2P5 195 aa13.16□□□□□ -0.3
COL9A2-204ENST00000427563 C6orf223Q8N319 242 aa13.16□□□□□ -0.3
COL9A2-204ENST00000427563 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
COL9A2-204ENST00000427563 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
COL9A2-204ENST00000427563 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
COL9A2-204ENST00000427563 K7EQM0 130 aa13.15□□□□□ -0.3
COL9A2-204ENST00000427563 TAGLN2P37802 199 aaKnown RBP13.15□□□□□ -0.3
COL9A2-204ENST00000427563 VAX2Q9UIW0 290 aa13.15□□□□□ -0.3
COL9A2-204ENST00000427563 ICOSQ9Y6W8 199 aa13.15□□□□□ -0.3
COL9A2-204ENST00000427563 TRAV4A0A0B4J268 109 aa13.14□□□□□ -0.31
COL9A2-204ENST00000427563 SCO2A0A1W2PP80 73 aa13.14□□□□□ -0.31
COL9A2-204ENST00000427563 PFN1P07737 140 aaKnown RBP13.14□□□□□ -0.31
COL9A2-204ENST00000427563 MEF2BQ02080 365 aaPredicted RBP13.14□□□□□ -0.31
COL9A2-204ENST00000427563 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
COL9A2-204ENST00000427563 SOHLH1Q5JUK2 328 aa13.14□□□□□ -0.31
COL9A2-204ENST00000427563 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms