RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TYMSP04818 313 aa12.71□□□□□ -0.37
GPC1-205ENST00000427506 TNP2Q05952 138 aa12.71□□□□□ -0.37
GPC1-205ENST00000427506 MRPL23Q16540 153 aaKnown RBP12.71□□□□□ -0.37
GPC1-205ENST00000427506 ZFP69Q49AA0 526 aa12.71□□□□□ -0.37
GPC1-205ENST00000427506 PRNTQ86SH4 94 aa12.71□□□□□ -0.37
GPC1-205ENST00000427506 M0R2P5 195 aa12.7□□□□□ -0.38
GPC1-205ENST00000427506 TAAR5O14804 337 aa12.7□□□□□ -0.38
GPC1-205ENST00000427506 FLI1Q01543 452 aaPredicted RBP12.7□□□□□ -0.38
GPC1-205ENST00000427506 CYB561D1Q8N8Q1 229 aa12.7□□□□□ -0.38
GPC1-205ENST00000427506 OR4C5Q8NGB2 326 aa12.7□□□□□ -0.38
GPC1-205ENST00000427506 DNAH2Q9P225 4427 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 A0A1W2PPQ1 181 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 A0A1W2PRE2 83 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 G3V3Q6 166 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 GCGP01275 180 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 IFNA7P01567 189 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 ZNF726P1Q15940 193 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 TMEM75Q8N9X5 138 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 PCNPQ8WW12 178 aaKnown RBP12.69□□□□□ -0.38
GPC1-205ENST00000427506 KRTAP1-5Q9BYS1 174 aa12.69□□□□□ -0.38
GPC1-205ENST00000427506 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
GPC1-205ENST00000427506 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
GPC1-205ENST00000427506 SMLR1H3BR10 107 aa12.68□□□□□ -0.38
GPC1-205ENST00000427506 ZNF80P51504 273 aaPredicted RBP12.68□□□□□ -0.38
GPC1-205ENST00000427506 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
GPC1-205ENST00000427506 UBE2G2P60604 165 aa12.68□□□□□ -0.38
GPC1-205ENST00000427506 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
GPC1-205ENST00000427506 NEGR1Q7Z3B1 354 aa12.68□□□□□ -0.38
GPC1-205ENST00000427506 MUC4Q99102 2169 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 SIVA1O15304 175 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 NXPH4O95158 308 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 IGLV2-11P01706 119 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 MED14OSP0DP75 135 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 SRIP30626 198 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 SAPCD1Q5SSQ6 148 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 FAT2Q9NYQ8 4349 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 DNAH17Q9UFH2 4485 aa12.67□□□□□ -0.38
GPC1-205ENST00000427506 C9JCJ5 164 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 K7EQD1 137 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 ORM1P02763 201 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 PFN1P07737 140 aaKnown RBP12.66□□□□□ -0.38
GPC1-205ENST00000427506 GYPEP15421 78 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 PPT1P50897 306 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 ZNF575Q86XF7 245 aa12.66□□□□□ -0.38
GPC1-205ENST00000427506 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
GPC1-205ENST00000427506 LINC00479Q96M42 142 aa12.65□□□□□ -0.38
GPC1-205ENST00000427506 CYTL1Q9NRR1 136 aa12.65□□□□□ -0.38
GPC1-205ENST00000427506 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
GPC1-205ENST00000427506 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
GPC1-205ENST00000427506 ZNF876PQ49A33 203 aa12.64□□□□□ -0.39
GPC1-205ENST00000427506 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
GPC1-205ENST00000427506 MAP1LC3BQ9GZQ8 125 aa12.64□□□□□ -0.39
GPC1-205ENST00000427506 FAM74A7A6NL05 159 aa12.63□□□□□ -0.39
GPC1-205ENST00000427506 PEX7O00628 323 aa12.63□□□□□ -0.39
GPC1-205ENST00000427506 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
GPC1-205ENST00000427506 TXNDC17Q9BRA2 123 aa12.63□□□□□ -0.39
GPC1-205ENST00000427506 ARL2-SNX15V9GYD0 113 aa12.63□□□□□ -0.39
GPC1-205ENST00000427506 C16orf90A8MZG2 172 aa12.62□□□□□ -0.39
GPC1-205ENST00000427506 BTF3P20290 206 aaKnown RBP12.62□□□□□ -0.39
GPC1-205ENST00000427506 KCNRGQ8N5I3 272 aa12.62□□□□□ -0.39
GPC1-205ENST00000427506 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
GPC1-205ENST00000427506 LINC00315P59091 139 aa12.61□□□□□ -0.39
GPC1-205ENST00000427506 NHLRC2Q8NBF2 726 aa12.61□□□□□ -0.39
GPC1-205ENST00000427506 LOC100131303A0A0U1RQF7 123 aa12.6□□□□□ -0.39
GPC1-205ENST00000427506 FABP5P3A8MUU1 101 aa12.6□□□□□ -0.39
GPC1-205ENST00000427506 GATA1P15976 413 aaPredicted RBP12.6□□□□□ -0.39
GPC1-205ENST00000427506 S100A4P26447 101 aaKnown RBP12.6□□□□□ -0.39
GPC1-205ENST00000427506 ZNF345Q14585 488 aa12.6□□□□□ -0.39
GPC1-205ENST00000427506 Q86TA4 180 aa12.6□□□□□ -0.39
GPC1-205ENST00000427506 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
GPC1-205ENST00000427506 TRAV9-2A0A087WT02 112 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 PGPEP1LA6NFU8 196 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 RS1O15537 224 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 CIDEAO60543 219 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 FHITP49789 147 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 UBE2G1P62253 170 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 CFAP126Q5VTH2 177 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 CST9LP1Q5W188 147 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
GPC1-205ENST00000427506 PKD1P98161 4303 aa12.58□□□□□ -0.39
GPC1-205ENST00000427506 A0A0D9SG52 128 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 KANTRA0A1W2PQU2 76 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 RNASE3P12724 160 aaKnown RBP12.58□□□□□ -0.4
GPC1-205ENST00000427506 ZNF506Q5JVG8 444 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 DPPA3Q6W0C5 159 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 SPATA12Q7Z6I5 190 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 OR11H4Q8NGC9 324 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 PRADC1Q9BSG0 188 aa12.58□□□□□ -0.4
GPC1-205ENST00000427506 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
GPC1-205ENST00000427506 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 ASIPP42127 132 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 FAM213BQ8TBF2 198 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 SFT2D1Q8WV19 159 aa12.57□□□□□ -0.4
GPC1-205ENST00000427506 PTH2Q96A98 100 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms