RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
APOBEC3D-202ENST00000427494 APCP25054 2843 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 TRBV7-9A0A0J9YWB2 115 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 LGALS9O00182 355 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 EREGO14944 169 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
APOBEC3D-202ENST00000427494 OR4C46A6NHA9 309 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 H0Y8G0 127 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 J3QKU1 62 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 TCF21O43680 179 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 GAS8-AS1O95177 125 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 EVI2AP22794 236 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.72
APOBEC3D-202ENST00000427494 IGHV4-4A0A075B6R2 117 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 ZNF688P0C7X2 276 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 ASIPP42127 132 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 PET117Q6UWS5 81 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 ZNF747Q9BV97 191 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.73
APOBEC3D-202ENST00000427494 TEX15Q9BXT5 2789 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 A0A096LNJ9 63 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 M0R143 59 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 TNFRSF6BO95407 300 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 IGLC3P0DOY3 106 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 S100A4P26447 101 aaKnown RBP10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 C2orf88Q9BSF0 95 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 SNHG12Q9BXW3 62 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 UQCR10Q9UDW1 63 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 CREBBPQ92793 2442 aa10.51□□□□□ -0.73
APOBEC3D-202ENST00000427494 MXRA5Q9NR99 2828 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 GATA1P15976 413 aaPredicted RBP10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 FXYD7P58549 80 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 SNRPD3P62318 126 aaKnown RBP10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 MCRIP2Q9BUT9 160 aaKnown RBP10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 DOPEY2Q9Y3R5 2298 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 TENM4Q6N022 2769 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 K7EQG2 157 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 DEFB136Q30KP8 78 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 WFDC12Q8WWY7 111 aa10.5□□□□□ -0.73
APOBEC3D-202ENST00000427494 KLLNB2CW77 178 aa10.49□□□□□ -0.73
APOBEC3D-202ENST00000427494 M0R381 172 aa10.49□□□□□ -0.73
APOBEC3D-202ENST00000427494 HBDP02042 147 aa10.49□□□□□ -0.73
APOBEC3D-202ENST00000427494 SLURP1P55000 103 aa10.49□□□□□ -0.73
APOBEC3D-202ENST00000427494 TMEM86BQ8N661 226 aa10.49□□□□□ -0.73
APOBEC3D-202ENST00000427494 A0A1B0GV90 55 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 GNRH2O43555 120 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 SPRY2O43597 315 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 IGLL1P15814 213 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 PHLDA3Q9Y5J5 127 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 Q6ZN92 141 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 OR2K2Q8NGT1 345 aa10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 NXT2Q9NPJ8 142 aaKnown RBP10.48□□□□□ -0.73
APOBEC3D-202ENST00000427494 A0A0J9YX75 114 aa10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 hDV102S1A0JD36 115 aa10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 DNAJC9-AS1A6NH13 148 aa10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 LEPP41159 167 aa10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 MRPL52Q86TS9 123 aaKnown RBP10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
APOBEC3D-202ENST00000427494 LINC01546A6NGU7 62 aa10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 LINC01619G3V211 115 aa10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 IGKV3-20P01619 116 aa10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 HNRNPA3P51991 378 aaKnown RBP10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 C4orf3Q8WVX3 66 aa10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 ODF3Q96PU9 254 aa10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 ITPR3Q14573 2671 aa10.46□□□□□ -0.73
APOBEC3D-202ENST00000427494 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 ADAMTSL5Q6ZMM2 481 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 Q6ZSV7 163 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 NRACQ8N912 160 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 OR11H1Q8NG94 326 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 SCRT2Q9NQ03 307 aa10.46□□□□□ -0.74
APOBEC3D-202ENST00000427494 TRAV12-3A0A0B4J271 114 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 C7orf71A4D174 169 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 HSBP1L1C9JCN9 74 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 LURAP1LQ8IV03 231 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 Q8N8P6 123 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 DPF1Q92782 380 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 MRAP2Q96G30 205 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 DUX3Q96PT4 197 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 NBPF19A0A087WUL8 3843 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 KLHL30-AS1Q8NEE0 82 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 DPH3P1Q9H4G8 78 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 ST20Q9HBF5 79 aa10.45□□□□□ -0.74
APOBEC3D-202ENST00000427494 BATFQ16520 125 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms