RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 SDF2L1Q9HCN8 221 aa7.44□□□□□ -1.22
LINC01238-202ENST00000426962 CYTL1Q9NRR1 136 aa7.44□□□□□ -1.22
LINC01238-202ENST00000426962 MRPS16Q9Y3D3 137 aaKnown RBP7.44□□□□□ -1.22
LINC01238-202ENST00000426962 ICOSQ9Y6W8 199 aa7.44□□□□□ -1.22
LINC01238-202ENST00000426962 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 GGTLC3B5MD39 225 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 M0R2P5 195 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 IGLV2-11P01706 119 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 TYMSP04818 313 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 MRPL23Q16540 153 aaKnown RBP7.43□□□□□ -1.22
LINC01238-202ENST00000426962 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 SAPCD1Q5SSQ6 148 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 CYB561D1Q8N8Q1 229 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 TMEM75Q8N9X5 138 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 ZNF479Q96JC4 524 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
LINC01238-202ENST00000426962 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
LINC01238-202ENST00000426962 A0A1W2PPQ1 181 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 SMLR1H3BR10 107 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 GCGP01275 180 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 IFNA7P01567 189 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 SFTA3P0C7M3 94 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 ZNF80P51504 273 aaPredicted RBP7.42□□□□□ -1.22
LINC01238-202ENST00000426962 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 MUC4Q99102 2169 aa7.42□□□□□ -1.22
LINC01238-202ENST00000426962 TRAV4A0A0B4J268 109 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 HMSDA8MTL9 139 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 PFN1P07737 140 aaKnown RBP7.41□□□□□ -1.22
LINC01238-202ENST00000426962 PPT1P50897 306 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 FGF8P55075 233 aaPredicted RBP7.41□□□□□ -1.22
LINC01238-202ENST00000426962 UBE2G2P60604 165 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 ZNF345Q14585 488 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 ZFP69Q49AA0 526 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 LYPD5Q6UWN5 251 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 NEGR1Q7Z3B1 354 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 KCNRGQ8N5I3 272 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 OR4C5Q8NGB2 326 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 LINC00479Q96M42 142 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 C11orf21Q9P2W6 132 aa7.41□□□□□ -1.22
LINC01238-202ENST00000426962 PKD1P98161 4303 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 TRAV34A0A0B4J273 112 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 A0A0D9SG52 128 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 FAM74A7A6NL05 159 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 K7EQD1 137 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 ORM1P02763 201 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 BTF3P20290 206 aaKnown RBP7.4□□□□□ -1.22
LINC01238-202ENST00000426962 TNP2Q05952 138 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 STOML3Q8TAV4 291 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 HIST1H2BAQ96A08 127 aa7.4□□□□□ -1.22
LINC01238-202ENST00000426962 MAP1LC3B2A6NCE7 125 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 C9JCJ5 164 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 PEX7O00628 323 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 SIVA1O15304 175 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 CIDEAO60543 219 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 SEC11BP0C7V7 166 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 GYPEP15421 78 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 ZNF876PQ49A33 203 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 OR11H4Q8NGC9 324 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 PCNPQ8WW12 178 aaKnown RBP7.39□□□□□ -1.23
LINC01238-202ENST00000426962 KRTAP1-5Q9BYS1 174 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 MAP1LC3BQ9GZQ8 125 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 ARL2-SNX15V9GYD0 113 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 PKHD1P08F94 4074 aa7.39□□□□□ -1.23
LINC01238-202ENST00000426962 UMAD1C9J7I0 102 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 NXPH4O95158 308 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 MED14OSP0DP75 135 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 SRIP30626 198 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 FHITP49789 147 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 PTH2Q96A98 100 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 C9orf85Q96MD7 179 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 TXNDC17Q9BRA2 123 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 ZFP30Q9Y2G7 519 aa7.38□□□□□ -1.23
LINC01238-202ENST00000426962 IGKV3D-20A0A0C4DH25 116 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 KANTRA0A1W2PQU2 76 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
LINC01238-202ENST00000426962 GATA1P15976 413 aaPredicted RBP7.37□□□□□ -1.23
LINC01238-202ENST00000426962 EIF5AP63241 154 aaKnown RBP7.37□□□□□ -1.23
LINC01238-202ENST00000426962 CFAP126Q5VTH2 177 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 CST9LP1Q5W188 147 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 SFT2D1Q8WV19 159 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 MBD3L1Q8WWY6 194 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 FMC1Q96HJ9 113 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
LINC01238-202ENST00000426962 ZNF471Q9BX82 626 aaPredicted RBP7.37□□□□□ -1.23
LINC01238-202ENST00000426962 DYNC1H1Q14204 4646 aaKnown RBP7.36□□□□□ -1.23
LINC01238-202ENST00000426962 TRAV9-2A0A087WT02 112 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 RS1O15537 224 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 BCL2L11O43521 198 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 S100A4P26447 101 aaKnown RBP7.36□□□□□ -1.23
LINC01238-202ENST00000426962 CRIP1P50238 77 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 UBE2G1P62253 170 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 DPPA3Q6W0C5 159 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 COX8CQ7Z4L0 72 aa7.36□□□□□ -1.23
LINC01238-202ENST00000426962 TRBV6-1A0A0K0K1D8 114 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 TRBV6-4A0A1B0GX49 114 aa7.35□□□□□ -1.23
LINC01238-202ENST00000426962 K7EP13 123 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms