RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 LINC00479Q96M42 142 aa12.05□□□□□ -0.48
LMCD1-204ENST00000426878 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
LMCD1-204ENST00000426878 ZNF80P51504 273 aaPredicted RBP12.04□□□□□ -0.48
LMCD1-204ENST00000426878 SMUG1Q53HV7 270 aa12.04□□□□□ -0.48
LMCD1-204ENST00000426878 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
LMCD1-204ENST00000426878 NAGKQ9UJ70 344 aa12.04□□□□□ -0.48
LMCD1-204ENST00000426878 FRAS1Q86XX4 4008 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 GCGP01275 180 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 PFN1P07737 140 aaKnown RBP12.03□□□□□ -0.48
LMCD1-204ENST00000426878 RAB5CP51148 216 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 FAM3BP58499 235 aaPredicted RBP12.03□□□□□ -0.48
LMCD1-204ENST00000426878 ZFP69Q49AA0 526 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
LMCD1-204ENST00000426878 AKAP14Q86UN6 197 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 RASL10AQ92737 203 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 SDF2L1Q9HCN8 221 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
LMCD1-204ENST00000426878 TRAV34A0A0B4J273 112 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 IGHV3-16A0A0C4DH30 117 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 GNRH2O43555 120 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 NUDT3O95989 172 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
LMCD1-204ENST00000426878 TYMSP04818 313 aa12.02□□□□□ -0.49
LMCD1-204ENST00000426878 CST9LP1Q5W188 147 aa12.02□□□□□ -0.49
LMCD1-204ENST00000426878 COX8CQ7Z4L0 72 aa12.02□□□□□ -0.49
LMCD1-204ENST00000426878 C11orf21Q9P2W6 132 aa12.02□□□□□ -0.49
LMCD1-204ENST00000426878 EPPK1P58107 5090 aaKnown RBP12.01□□□□□ -0.49
LMCD1-204ENST00000426878 TRBV6-1A0A0K0K1D8 114 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 PAGE4O60829 102 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 SLAQ13239 276 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 Q86TA4 180 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 SLC51BQ86UW2 128 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 FMC1Q96HJ9 113 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 ZFP30Q9Y2G7 519 aa12.01□□□□□ -0.49
LMCD1-204ENST00000426878 NACAE9PAV3 2078 aa12□□□□□ -0.49
LMCD1-204ENST00000426878 TRAV1-1A0A0B4J248 108 aa12□□□□□ -0.49
LMCD1-204ENST00000426878 M0R2P5 195 aa12□□□□□ -0.49
LMCD1-204ENST00000426878 VSIG2Q96IQ7 327 aa12□□□□□ -0.49
LMCD1-204ENST00000426878 DNAH2Q9P225 4427 aa12□□□□□ -0.49
LMCD1-204ENST00000426878 hCG_2014768A0A024R1R8 64 aa11.99□□□□□ -0.49
LMCD1-204ENST00000426878 A0A0J9YY99 117 aa11.99□□□□□ -0.49
LMCD1-204ENST00000426878 SULT1A2P50226 295 aa11.99□□□□□ -0.49
LMCD1-204ENST00000426878 FABP5P3A8MUU1 101 aa11.98□□□□□ -0.49
LMCD1-204ENST00000426878 CCL18P55774 89 aa11.98□□□□□ -0.49
LMCD1-204ENST00000426878 FHL2Q14192 279 aa11.98□□□□□ -0.49
LMCD1-204ENST00000426878 PRO0255Q9UI72 69 aa11.98□□□□□ -0.49
LMCD1-204ENST00000426878 A0A1B0GV50 99 aa11.97□□□□□ -0.49
LMCD1-204ENST00000426878 LTAP01374 205 aa11.97□□□□□ -0.49
LMCD1-204ENST00000426878 S100A9P06702 114 aaKnown RBP11.97□□□□□ -0.49
LMCD1-204ENST00000426878 UBE2G1P62253 170 aa11.97□□□□□ -0.49
LMCD1-204ENST00000426878 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
LMCD1-204ENST00000426878 TRAV4A0A0B4J268 109 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 IGHV3-53P01767 116 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 Q6ZR54 194 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 PTH2Q96A98 100 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 C9orf85Q96MD7 179 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 HHLA3Q9XRX5 114 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 LINC00588Q9Y4M8 146 aa11.96□□□□□ -0.49
LMCD1-204ENST00000426878 A0A096LPF7 62 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 IGKV3D-20A0A0C4DH25 116 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 PAX4O43316 350 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 AKR1C3P42330 323 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 CRIP1P50238 77 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 CRYBA4P53673 196 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 CCL20P78556 96 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 ZC2HC1AQ96GY0 325 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
LMCD1-204ENST00000426878 SCO2A0A1W2PP80 73 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 RNASE3P12724 160 aaKnown RBP11.94□□□□□ -0.5
LMCD1-204ENST00000426878 ESRGQ1W209 222 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 ZNF674Q2M3X9 581 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 ZNF876PQ49A33 203 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 FAM162BQ5T6X4 162 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 OR4C5Q8NGB2 326 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 TXNDC17Q9BRA2 123 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 DNAH17Q9UFH2 4485 aa11.94□□□□□ -0.5
LMCD1-204ENST00000426878 IGLV2-18A0A075B6J9 118 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 CIDEAO60543 219 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 SFTA3P0C7M3 94 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 PIK3CD-AS1Q5SR53 167 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
LMCD1-204ENST00000426878 FAT2Q9NYQ8 4349 aa11.92□□□□□ -0.5
LMCD1-204ENST00000426878 A0A1B0GVG6 124 aa11.92□□□□□ -0.5
LMCD1-204ENST00000426878 M0R2N4 97 aa11.92□□□□□ -0.5
LMCD1-204ENST00000426878 SH2D1AO60880 128 aa11.92□□□□□ -0.5
LMCD1-204ENST00000426878 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
LMCD1-204ENST00000426878 B4DEV8 164 aa11.91□□□□□ -0.5
LMCD1-204ENST00000426878 KRBOX1C9JBD0 128 aa11.91□□□□□ -0.5
LMCD1-204ENST00000426878 ORM1P02763 201 aa11.91□□□□□ -0.5
LMCD1-204ENST00000426878 ASIPP42127 132 aa11.91□□□□□ -0.5
LMCD1-204ENST00000426878 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
LMCD1-204ENST00000426878 LINC00336Q6ZUF6 198 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms