RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CNFNQ9BYD5 112 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 PKD1L2Q7Z442 2459 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 TRBV25-1A0A075B6N4 114 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
ERCC3-202ENST00000426778 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
ERCC3-202ENST00000426778 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 PPBPP02775 128 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 UBE2E1P51965 193 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 NRACQ8N912 160 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 RPL39LQ96EH5 51 aaKnown RBP10.97□□□□□ -0.65
ERCC3-202ENST00000426778 K7EP34 96 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 DPF1Q92782 380 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
ERCC3-202ENST00000426778 A0A1W2PPM0 123 aa10.96□□□□□ -0.65
ERCC3-202ENST00000426778 EDN2P20800 178 aa10.96□□□□□ -0.65
ERCC3-202ENST00000426778 GTF2H5Q6ZYL4 71 aa10.96□□□□□ -0.65
ERCC3-202ENST00000426778 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
ERCC3-202ENST00000426778 Q8N8P6 123 aa10.96□□□□□ -0.65
ERCC3-202ENST00000426778 OR4X2Q8NGF9 303 aa10.96□□□□□ -0.65
ERCC3-202ENST00000426778 DPM2O94777 84 aa10.96□□□□□ -0.66
ERCC3-202ENST00000426778 KLRB1Q12918 225 aa10.96□□□□□ -0.66
ERCC3-202ENST00000426778 SLC50A1Q9BRV3 221 aa10.96□□□□□ -0.66
ERCC3-202ENST00000426778 ZFYVE26Q68DK2 2539 aa10.96□□□□□ -0.66
ERCC3-202ENST00000426778 NPFFO15130 113 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 ATP5G2Q06055 141 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 C1orf122Q6ZSJ8 110 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 SMIM15Q7Z3B0 74 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 C19orf84I3L1E1 186 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 K7ERU9 68 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 MGPP08493 103 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 LMO4P61968 165 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 LAGE3Q14657 143 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 MYOZ3Q8TDC0 251 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 MUC4Q99102 2169 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 Q6ZS46 218 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 C5orf56Q8N8D9 126 aa10.95□□□□□ -0.66
ERCC3-202ENST00000426778 COL25A1Q9BXS0 654 aaPredicted RBP10.95□□□□□ -0.66
ERCC3-202ENST00000426778 GNRH2O43555 120 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 SMIM13P0DJ93 91 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
ERCC3-202ENST00000426778 COTL1Q14019 142 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 NOTCH3Q9UM47 2321 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 FAM208BQ5VWN6 2430 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 ARL3P36405 182 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 EMP1P54849 157 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 RPL24P83731 157 aaKnown RBP10.94□□□□□ -0.66
ERCC3-202ENST00000426778 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
ERCC3-202ENST00000426778 TLN2Q9Y4G6 2542 aa10.93□□□□□ -0.66
ERCC3-202ENST00000426778 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
ERCC3-202ENST00000426778 MXRA5Q9NR99 2828 aa10.93□□□□□ -0.66
ERCC3-202ENST00000426778 RNASE4P34096 147 aaKnown RBP10.93□□□□□ -0.66
ERCC3-202ENST00000426778 TRAV41A0A0B4J266 112 aa10.93□□□□□ -0.66
ERCC3-202ENST00000426778 FABP2P12104 132 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 SFTA2Q6UW10 78 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 GPHB5Q86YW7 130 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 SIVA1O15304 175 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 ACACBO00763 2458 aa10.92□□□□□ -0.66
ERCC3-202ENST00000426778 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 ANXA2RQ3ZCQ2 193 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 ARL6IP6Q8N6S5 226 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 JPT2Q9H910 190 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 SETD2Q9BYW2 2564 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-202ENST00000426778 IGHV4-38-2P0DP08 117 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 RAB9AP51151 201 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 BLCAPP62952 87 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 SRSF2Q01130 221 aaKnown RBP10.91□□□□□ -0.66
ERCC3-202ENST00000426778 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
ERCC3-202ENST00000426778 TRBV7-1A0A0A6YYK4 115 aa10.9□□□□□ -0.66
ERCC3-202ENST00000426778 RASL10AQ92737 203 aa10.9□□□□□ -0.66
ERCC3-202ENST00000426778 PHLDA3Q9Y5J5 127 aa10.9□□□□□ -0.66
ERCC3-202ENST00000426778 ZFAND2AQ8N6M9 145 aa10.9□□□□□ -0.66
ERCC3-202ENST00000426778 ATP5LO75964 103 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 PF4V1P10720 104 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.675e-7■■□□□ 14
ERCC3-202ENST00000426778 TMEM95Q3KNT9 176 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 CEND1Q8N111 149 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 PIFOQ8TCI5 191 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 SCGB3A1Q96QR1 104 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 NPFFR1Q9GZQ6 430 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-202ENST00000426778 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
ERCC3-202ENST00000426778 A0A087WX48 190 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 ABCA12Q86UK0 2595 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 U3KQE9 123 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 IGHV4-39P01824 125 aa10.88□□□□□ -0.67
ERCC3-202ENST00000426778 PHLDA1Q8WV24 401 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-202ENST00000426778 H3BMG7 143 aa10.87□□□□□ -0.67
ERCC3-202ENST00000426778 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms