RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ZNF256Q9Y2P7 627 aaPredicted RBP10.33□□□□□ -0.76
USP42-203ENST00000426246 CD300EQ496F6 205 aaPredicted RBP10.32□□□□□ -0.76
USP42-203ENST00000426246 DEFB125Q8N687 156 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 TENM4Q6N022 2769 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 APOMO95445 188 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP42-203ENST00000426246 LINC01545Q5VT33 79 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 GTF2H5Q6ZYL4 71 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 K7ERU9 68 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 GNRH2O43555 120 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 FXYD2P54710 66 aa10.32□□□□□ -0.76
USP42-203ENST00000426246 SRSF1Q07955 248 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP42-203ENST00000426246 SMAD7O15105 426 aaKnown RBP10.31□□□□□ -0.76
USP42-203ENST00000426246 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
USP42-203ENST00000426246 RPL39LQ96EH5 51 aaKnown RBP10.31□□□□□ -0.76
USP42-203ENST00000426246 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
USP42-203ENST00000426246 FABP2P12104 132 aa10.31□□□□□ -0.76
USP42-203ENST00000426246 BLCAPP62952 87 aa10.31□□□□□ -0.76
USP42-203ENST00000426246 UNQ9165/PRO28630Q6UXU0 137 aa10.31□□□□□ -0.76
USP42-203ENST00000426246 A0A096LNJ9 63 aa10.31□□□□□ -0.76
USP42-203ENST00000426246 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
USP42-203ENST00000426246 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 Q8N9W7 124 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 JPT2Q9H910 190 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 INS-IGF2F8WCM5 200 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 IGKCP01834 107 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 RBX1P62877 108 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 C2orf91Q6ZV80 131 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 PIP4P2Q8N4L2 257 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 H3BUX3 64 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 CD5LO43866 347 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 EDN2P20800 178 aa10.3□□□□□ -0.76
USP42-203ENST00000426246 PAX8Q06710 450 aa10.29□□□□□ -0.76
USP42-203ENST00000426246 C11orf44Q8N8P7 122 aa10.29□□□□□ -0.76
USP42-203ENST00000426246 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
USP42-203ENST00000426246 F8W735 103 aaPredicted RBP10.29□□□□□ -0.76
USP42-203ENST00000426246 SMIM13P0DJ93 91 aa10.29□□□□□ -0.76
USP42-203ENST00000426246 MS4A6AQ9H2W1 248 aa10.29□□□□□ -0.76
USP42-203ENST00000426246 IGKV3D-20A0A0C4DH25 116 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 WI2-2373I1.2A0A1W2PRP0 233 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 NPIPB6E9PJ23 425 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 ZNF688P0C7X2 276 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 Q6AWC8 147 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 OR10J6PQ8NGY7 276 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 CHD6Q8TD26 2715 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 TRAV12-3A0A0B4J271 114 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 ZNF418Q8TF45 676 aaPredicted RBP10.28□□□□□ -0.76
USP42-203ENST00000426246 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 PAX2Q02962 417 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
USP42-203ENST00000426246 BUB3O43684 328 aa10.27□□□□□ -0.76
USP42-203ENST00000426246 Q6ZS46 218 aa10.27□□□□□ -0.76
USP42-203ENST00000426246 GTSF1LQ9H1H1 148 aa10.27□□□□□ -0.76
USP42-203ENST00000426246 ATP5J2P56134 94 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 TEX15Q9BXT5 2789 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 TRAV41A0A0B4J266 112 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 TMEM170BQ5T4T1 132 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 LYPD1Q8N2G4 141 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 OR11H6Q8NGC7 330 aa10.27□□□□□ -0.77
USP42-203ENST00000426246 H3BMG7 143 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 DPM2O94777 84 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 KLHL30-AS1Q8NEE0 82 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 OR1N2Q8NGR9 330 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 CCDC140Q96MF4 163 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 NPFFO15130 113 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 CD7P09564 240 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 IGHV4-38-2P0DP08 117 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 SMAGPQ0VAQ4 97 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 ZNF469Q96JG9 3925 aaPredicted RBP10.26□□□□□ -0.77
USP42-203ENST00000426246 IGHV4-39P01824 125 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 SH2D6Q7Z4S9 175 aa10.26□□□□□ -0.77
USP42-203ENST00000426246 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
USP42-203ENST00000426246 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 BEX4Q9NWD9 120 aaPredicted RBP10.25□□□□□ -0.77
USP42-203ENST00000426246 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
USP42-203ENST00000426246 PDE6HQ13956 83 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 PRR9Q5T870 116 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 C10orf99Q6UWK7 81 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 MRPL52Q86TS9 123 aaKnown RBP10.25□□□□□ -0.77
USP42-203ENST00000426246 IGHV3OR16-12A0A075B7B8 117 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 OR11H12B2RN74 326 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 PRM2P04554 102 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 HSD52Q0P140 79 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 TTC9CQ8N5M4 171 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 OR11H2Q8NH07 326 aa10.25□□□□□ -0.77
USP42-203ENST00000426246 ODF3BA8MYP8 253 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
USP42-203ENST00000426246 KLK9Q9UKQ9 250 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 TRBV25-1A0A075B6N4 114 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 SCGB1C2P0DMR2 95 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 NPC2P61916 151 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 LMO4P61968 165 aa10.24□□□□□ -0.77
USP42-203ENST00000426246 LAGE3Q14657 143 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms