RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 C11orf21Q9P2W6 132 aa12.44□□□□□ -0.42
IGHV3-47-201ENST00000425060 NAGKQ9UJ70 344 aa12.44□□□□□ -0.42
IGHV3-47-201ENST00000425060 LINC00588Q9Y4M8 146 aa12.44□□□□□ -0.42
IGHV3-47-201ENST00000425060 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
IGHV3-47-201ENST00000425060 TYMSP04818 313 aa12.43□□□□□ -0.42
IGHV3-47-201ENST00000425060 TMUB2Q71RG4 321 aa12.43□□□□□ -0.42
IGHV3-47-201ENST00000425060 PRNTQ86SH4 94 aa12.43□□□□□ -0.42
IGHV3-47-201ENST00000425060 ZNRF2Q8NHG8 242 aa12.43□□□□□ -0.42
IGHV3-47-201ENST00000425060 MBD3L1Q8WWY6 194 aa12.43□□□□□ -0.42
IGHV3-47-201ENST00000425060 TRAV34A0A0B4J273 112 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 UMAD1C9J7I0 102 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 GCGP01275 180 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 CCL18P55774 89 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 FHL2Q14192 279 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 SAPCD1Q5SSQ6 148 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 KCNS1Q96KK3 526 aa12.42□□□□□ -0.42
IGHV3-47-201ENST00000425060 A0A096LPF7 62 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 PEX7O00628 323 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 IFNA7P01567 189 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 SMUG1Q53HV7 270 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 SDF2L1Q9HCN8 221 aa12.41□□□□□ -0.42
IGHV3-47-201ENST00000425060 RTL8CO15255 209 aa12.4□□□□□ -0.42
IGHV3-47-201ENST00000425060 ESRGQ1W209 222 aa12.4□□□□□ -0.42
IGHV3-47-201ENST00000425060 LGALSLQ3ZCW2 172 aaPredicted RBP12.4□□□□□ -0.42
IGHV3-47-201ENST00000425060 STOML3Q8TAV4 291 aa12.4□□□□□ -0.42
IGHV3-47-201ENST00000425060 ARL2-SNX15V9GYD0 113 aa12.4□□□□□ -0.42
IGHV3-47-201ENST00000425060 M0R2P5 195 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 LINC00336Q6ZUF6 198 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 FAM213BQ8TBF2 198 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 SFT2D1Q8WV19 159 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 ZNF479Q96JC4 524 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 PRO0255Q9UI72 69 aa12.39□□□□□ -0.43
IGHV3-47-201ENST00000425060 HECTD4Q9Y4D8 3996 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 PFDN1O60925 122 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 SFTA3P0C7M3 94 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 PPT1P50897 306 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 CRYBA4P53673 196 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 SLAQ13239 276 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 COX8CQ7Z4L0 72 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 Q86TA4 180 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 HHLA3Q9XRX5 114 aa12.38□□□□□ -0.43
IGHV3-47-201ENST00000425060 PAX4O43316 350 aa12.37□□□□□ -0.43
IGHV3-47-201ENST00000425060 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
IGHV3-47-201ENST00000425060 C9orf85Q96MD7 179 aa12.37□□□□□ -0.43
IGHV3-47-201ENST00000425060 TCEAL7Q9BRU2 100 aa12.37□□□□□ -0.43
IGHV3-47-201ENST00000425060 UPK3BQ9BT76 320 aa12.37□□□□□ -0.43
IGHV3-47-201ENST00000425060 TRAV4A0A0B4J268 109 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 IGKV3D-20A0A0C4DH25 116 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 TRBV6-1A0A0K0K1D8 114 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 NBDYA0A0U1RRE5 68 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 PAGE4O60829 102 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 CRIP1P50238 77 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 CST9LP1Q5W188 147 aa12.36□□□□□ -0.43
IGHV3-47-201ENST00000425060 A0A1B0GVY2 172 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 FABP5P3A8MUU1 101 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 C1QBP02746 253 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 H2AFB1P0C5Y9 115 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 RNASE3P12724 160 aaKnown RBP12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 FMC1Q96HJ9 113 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 Q9H8V8 135 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 ZFP30Q9Y2G7 519 aa12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
IGHV3-47-201ENST00000425060 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
IGHV3-47-201ENST00000425060 PTH2Q96A98 100 aa12.34□□□□□ -0.43
IGHV3-47-201ENST00000425060 ZC2HC1AQ96GY0 325 aa12.34□□□□□ -0.43
IGHV3-47-201ENST00000425060 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
IGHV3-47-201ENST00000425060 A0A1B0GV50 99 aa12.33□□□□□ -0.44
IGHV3-47-201ENST00000425060 LTAP01374 205 aa12.33□□□□□ -0.44
IGHV3-47-201ENST00000425060 OR4C5Q8NGB2 326 aa12.33□□□□□ -0.44
IGHV3-47-201ENST00000425060 TRAV1-1A0A0B4J248 108 aa12.32□□□□□ -0.44
IGHV3-47-201ENST00000425060 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
IGHV3-47-201ENST00000425060 UBE2G1P62253 170 aa12.32□□□□□ -0.44
IGHV3-47-201ENST00000425060 ZNF876PQ49A33 203 aa12.32□□□□□ -0.44
IGHV3-47-201ENST00000425060 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
IGHV3-47-201ENST00000425060 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
IGHV3-47-201ENST00000425060 PKD1P98161 4303 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 PGPEP1LA6NFU8 196 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 C9JCJ5 164 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 RS1O15537 224 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 AKR1C3P42330 323 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 RAB5CP51148 216 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 CCL20P78556 96 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 ZNF674Q2M3X9 581 aa12.31□□□□□ -0.44
IGHV3-47-201ENST00000425060 K7EQD1 137 aa12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 SULT1A2P50226 295 aa12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 DNLZQ5SXM8 178 aa12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 EIF5AL1Q6IS14 154 aaKnown RBP12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 KRTAP1-5Q9BYS1 174 aa12.3□□□□□ -0.44
IGHV3-47-201ENST00000425060 SCO2A0A1W2PP80 73 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms