RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 C16orf92Q96LL3 132 aa11.58□□□□□ -0.56
C9orf3-204ENST00000424143 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 LY6HO94772 140 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 GRNP28799 593 aaKnown RBP11.57□□□□□ -0.56
C9orf3-204ENST00000424143 NBL1P41271 181 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 EFNA4P52798 201 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 C5orf56Q8N8D9 126 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 SPENQ96T58 3664 aaKnown RBP11.57□□□□□ -0.56
C9orf3-204ENST00000424143 H3BUA1 57 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 H3BVH4 76 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 NDUFS8O00217 210 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 CCL21O00585 134 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 SOCS3O14543 225 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 HOXA3O43365 443 aaPredicted RBP11.57□□□□□ -0.56
C9orf3-204ENST00000424143 ASIPP42127 132 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 WFDC2Q14508 124 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 OR10J6PQ8NGY7 276 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 SPOCK3Q9BQ16 436 aa11.57□□□□□ -0.56
C9orf3-204ENST00000424143 MAP1BP46821 2468 aaKnown RBP11.56□□□□□ -0.56
C9orf3-204ENST00000424143 ARHGAP32A7KAX9 2087 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 IGHV3-35A0A0C4DH35 117 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 RNF223E7ERA6 249 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 NDUFA4O00483 81 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
C9orf3-204ENST00000424143 UBE2D1P51668 147 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 RAXQ9Y2V3 346 aa11.56□□□□□ -0.56
C9orf3-204ENST00000424143 ACACAQ13085 2346 aa11.55□□□□□ -0.56
C9orf3-204ENST00000424143 IGHV3OR16-8A0A075B7F1 116 aa11.55□□□□□ -0.56
C9orf3-204ENST00000424143 COX6B1P14854 86 aa11.55□□□□□ -0.56
C9orf3-204ENST00000424143 ADORA2A-AS1P86434 159 aa11.55□□□□□ -0.56
C9orf3-204ENST00000424143 PRR9Q5T870 116 aa11.55□□□□□ -0.56
C9orf3-204ENST00000424143 LYRM7Q5U5X0 104 aa11.55□□□□□ -0.56
C9orf3-204ENST00000424143 MORN3Q6PF18 240 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-204ENST00000424143 ANKHD1Q8IWZ3 2542 aaKnown RBP11.55□□□□□ -0.56
C9orf3-204ENST00000424143 AZU1P20160 251 aa11.54□□□□□ -0.56
C9orf3-204ENST00000424143 SAA4P35542 130 aa11.54□□□□□ -0.56
C9orf3-204ENST00000424143 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
C9orf3-204ENST00000424143 TMEM141Q96I45 108 aa11.54□□□□□ -0.56
C9orf3-204ENST00000424143 TPRP12270 2363 aaKnown RBP11.54□□□□□ -0.56
C9orf3-204ENST00000424143 TRAV41A0A0B4J266 112 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 PRSS29PA6NIE9 313 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 G3V318 75 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 NPFFO15130 113 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 GPHB5Q86YW7 130 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 USMG5Q96IX5 58 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 C20orf173Q96LM9 149 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 SPAG8Q99932 426 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-204ENST00000424143 VCX2Q9H322 139 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 PHLDA3Q9Y5J5 127 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 AGRNO00468 2067 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 IGHV3-66A0A0C4DH42 116 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 H3BMG7 143 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
C9orf3-204ENST00000424143 TSSC4Q9Y5U2 329 aaPredicted RBP11.53□□□□□ -0.56
C9orf3-204ENST00000424143 HERVK_113P61574 105 aa11.52□□□□□ -0.57
C9orf3-204ENST00000424143 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.57
C9orf3-204ENST00000424143 CYSLTR1Q9Y271 337 aa11.52□□□□□ -0.57
C9orf3-204ENST00000424143 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
C9orf3-204ENST00000424143 IGF1P05019 195 aa11.51□□□□□ -0.57
C9orf3-204ENST00000424143 S100A4P26447 101 aaKnown RBP11.51□□□□□ -0.57
C9orf3-204ENST00000424143 LMO4P61968 165 aa11.51□□□□□ -0.57
C9orf3-204ENST00000424143 TIMM17AQ99595 171 aa11.51□□□□□ -0.57
C9orf3-204ENST00000424143 ANKRD11Q6UB99 2663 aaPredicted RBP11.51□□□□□ -0.57
C9orf3-204ENST00000424143 MUC3AQ02505 3323 aa11.51□□□□□ -0.57
C9orf3-204ENST00000424143 ZFHX4Q86UP3 3567 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 TRBV6-5A0A0K0K1A5 114 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 ARL3P36405 182 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 POLR2KP53803 58 aaKnown RBP11.5□□□□□ -0.57
C9orf3-204ENST00000424143 LINC00315P59091 139 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 UBE2D3P61077 147 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 UBE2D2P62837 147 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 ANXA2RQ3ZCQ2 193 aa11.5□□□□□ -0.57
C9orf3-204ENST00000424143 IGIPA6NJ69 53 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 LINC01548A6NM66 108 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 CD7P09564 240 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 KLRB1Q12918 225 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 ETDBQ3ZM63 59 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 CFAP126Q5VTH2 177 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 SELENOKQ9Y6D0 94 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 WNK2Q9Y3S1 2297 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 TRBV20-1A0A075B6N2 111 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 M0QXV9 152 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 VCYO14598 125 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 CRYGDP07320 174 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
C9orf3-204ENST00000424143 UCNP55089 124 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 PMVKQ15126 192 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 SBSPONQ8IVN8 264 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-204ENST00000424143 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
C9orf3-204ENST00000424143 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
C9orf3-204ENST00000424143 ZZEF1O43149 2961 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 C11orf86A6NJI1 115 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms