RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 UBE2G2P60604 165 aa15.23■□□□□ 0.03
TRAF4-204ENST00000422344 PRNTQ86SH4 94 aa15.23■□□□□ 0.03
TRAF4-204ENST00000422344 TMEM75Q8N9X5 138 aa15.23■□□□□ 0.03
TRAF4-204ENST00000422344 ZNRF2Q8NHG8 242 aa15.23■□□□□ 0.03
TRAF4-204ENST00000422344 PKD1P98161 4303 aa15.23■□□□□ 0.03
TRAF4-204ENST00000422344 DNAH11Q96DT5 4516 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 MAP1LC3B2A6NCE7 125 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 HMSDA8MTL9 139 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 RTL8CO15255 209 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 PAX4O43316 350 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 PPT1P50897 306 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 SLAQ13239 276 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 STOML3Q8TAV4 291 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 VSIG2Q96IQ7 327 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 C8orf49Q96NF6 230 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 NKX6-2Q9C056 277 aaPredicted RBP15.22■□□□□ 0.03
TRAF4-204ENST00000422344 MAP1LC3BQ9GZQ8 125 aa15.22■□□□□ 0.03
TRAF4-204ENST00000422344 A0A0D9SG52 128 aa15.21■□□□□ 0.03
TRAF4-204ENST00000422344 KANTRA0A1W2PQU2 76 aa15.21■□□□□ 0.03
TRAF4-204ENST00000422344 GNRH2O43555 120 aa15.21■□□□□ 0.03
TRAF4-204ENST00000422344 SMUG1Q53HV7 270 aa15.21■□□□□ 0.03
TRAF4-204ENST00000422344 SAPCD1Q5SSQ6 148 aa15.21■□□□□ 0.03
TRAF4-204ENST00000422344 PRO0255Q9UI72 69 aa15.21■□□□□ 0.03
TRAF4-204ENST00000422344 TRGV4A0A0C4DH28 118 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 IGHV3-16A0A0C4DH30 117 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 NBDYA0A0U1RRE5 68 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 GCGP01275 180 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 IGLV2-11P01706 119 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 TYMSP04818 313 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 C1orf134Q5TEV5 83 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 OR11H4Q8NGC9 324 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 ZNF471Q9BX82 626 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-204ENST00000422344 ICOSQ9Y6W8 199 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 ABCA13Q86UQ4 5058 aa15.2■□□□□ 0.02
TRAF4-204ENST00000422344 FAM74A7A6NL05 159 aa15.19■□□□□ 0.02
TRAF4-204ENST00000422344 M0R2P5 195 aa15.19■□□□□ 0.02
TRAF4-204ENST00000422344 BCL2L11O43521 198 aa15.19■□□□□ 0.02
TRAF4-204ENST00000422344 RASL10AQ92737 203 aa15.19■□□□□ 0.02
TRAF4-204ENST00000422344 HHLA3Q9XRX5 114 aa15.19■□□□□ 0.02
TRAF4-204ENST00000422344 A0A096LPF7 62 aa15.18■□□□□ 0.02
TRAF4-204ENST00000422344 PEX7O00628 323 aa15.18■□□□□ 0.02
TRAF4-204ENST00000422344 PFDN1O60925 122 aa15.18■□□□□ 0.02
TRAF4-204ENST00000422344 PFN1P07737 140 aaKnown RBP15.18■□□□□ 0.02
TRAF4-204ENST00000422344 EIF5AP63241 154 aaKnown RBP15.18■□□□□ 0.02
TRAF4-204ENST00000422344 ESRGQ1W209 222 aa15.18■□□□□ 0.02
TRAF4-204ENST00000422344 TRAV34A0A0B4J273 112 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 SEC11BP0C7V7 166 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 ZNF80P51504 273 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-204ENST00000422344 CRYBA4P53673 196 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 FHL2Q14192 279 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 HIST1H2BAQ96A08 127 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 LINC00479Q96M42 142 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 Q9H8V8 135 aa15.17■□□□□ 0.02
TRAF4-204ENST00000422344 MRPS16Q9Y3D3 137 aaKnown RBP15.17■□□□□ 0.02
TRAF4-204ENST00000422344 UMAD1C9J7I0 102 aa15.16■□□□□ 0.02
TRAF4-204ENST00000422344 SFTA3P0C7M3 94 aa15.16■□□□□ 0.02
TRAF4-204ENST00000422344 OR4C5Q8NGB2 326 aa15.16■□□□□ 0.02
TRAF4-204ENST00000422344 FAM213BQ8TBF2 198 aa15.16■□□□□ 0.02
TRAF4-204ENST00000422344 ZNF479Q96JC4 524 aa15.16■□□□□ 0.02
TRAF4-204ENST00000422344 TRAV4A0A0B4J268 109 aa15.15■□□□□ 0.02
TRAF4-204ENST00000422344 FHITP49789 147 aa15.15■□□□□ 0.02
TRAF4-204ENST00000422344 CST9LP1Q5W188 147 aa15.15■□□□□ 0.02
TRAF4-204ENST00000422344 UPK3BQ9BT76 320 aa15.15■□□□□ 0.02
TRAF4-204ENST00000422344 ARL2-SNX15V9GYD0 113 aa15.15■□□□□ 0.02
TRAF4-204ENST00000422344 MRPL23Q16540 153 aaKnown RBP15.14■□□□□ 0.01
TRAF4-204ENST00000422344 TTC32Q5I0X7 151 aa15.14■□□□□ 0.01
TRAF4-204ENST00000422344 Q86TA4 180 aa15.14■□□□□ 0.01
TRAF4-204ENST00000422344 SFT2D1Q8WV19 159 aa15.14■□□□□ 0.01
TRAF4-204ENST00000422344 PCNPQ8WW12 178 aaKnown RBP15.14■□□□□ 0.01
TRAF4-204ENST00000422344 C11orf21Q9P2W6 132 aa15.14■□□□□ 0.01
TRAF4-204ENST00000422344 UBE2G1P62253 170 aa15.13■□□□□ 0.01
TRAF4-204ENST00000422344 TMUB2Q71RG4 321 aa15.13■□□□□ 0.01
TRAF4-204ENST00000422344 TCEAL7Q9BRU2 100 aa15.13■□□□□ 0.01
TRAF4-204ENST00000422344 C9JCJ5 164 aa15.12■□□□□ 0.01
TRAF4-204ENST00000422344 TPT1P13693 172 aaKnown RBP15.12■□□□□ 0.01
TRAF4-204ENST00000422344 DPPA3Q6W0C5 159 aa15.12■□□□□ 0.01
TRAF4-204ENST00000422344 C6orf223Q8N319 242 aa15.12■□□□□ 0.01
TRAF4-204ENST00000422344 FABP5P3A8MUU1 101 aa15.11■□□□□ 0.01
TRAF4-204ENST00000422344 ORM1P02763 201 aa15.11■□□□□ 0.01
TRAF4-204ENST00000422344 SRIP30626 198 aa15.11■□□□□ 0.01
TRAF4-204ENST00000422344 ZNF876PQ49A33 203 aa15.11■□□□□ 0.01
TRAF4-204ENST00000422344 FMC1Q96HJ9 113 aa15.11■□□□□ 0.01
TRAF4-204ENST00000422344 A0A1B0GV50 99 aa15.1■□□□□ 0.01
TRAF4-204ENST00000422344 MBD3L1Q8WWY6 194 aa15.1■□□□□ 0.01
TRAF4-204ENST00000422344 ZFP30Q9Y2G7 519 aa15.1■□□□□ 0.01
TRAF4-204ENST00000422344 PAGE4O60829 102 aa15.09■□□□□ 0.01
TRAF4-204ENST00000422344 GYPEP15421 78 aa15.09■□□□□ 0.01
TRAF4-204ENST00000422344 S100A4P26447 101 aaKnown RBP15.09■□□□□ 0.01
TRAF4-204ENST00000422344 NEGR1Q7Z3B1 354 aa15.09■□□□□ 0.01
TRAF4-204ENST00000422344 ZNF575Q86XF7 245 aa15.09■□□□□ 0.01
TRAF4-204ENST00000422344 KRTAP4-5Q9BYR2 181 aa15.09■□□□□ 0.01
TRAF4-204ENST00000422344 H2AFB1P0C5Y9 115 aa15.08■□□□□ 0
TRAF4-204ENST00000422344 AKR1C3P42330 323 aa15.08■□□□□ 0
TRAF4-204ENST00000422344 C9orf85Q96MD7 179 aa15.08■□□□□ 0
TRAF4-204ENST00000422344 A0A1W2PPQ1 181 aa15.07■□□□□ 0
TRAF4-204ENST00000422344 K7EQD1 137 aa15.07■□□□□ 0
TRAF4-204ENST00000422344 ASIPP42127 132 aa15.07■□□□□ 0
TRAF4-204ENST00000422344 TXNDC17Q9BRA2 123 aa15.07■□□□□ 0
TRAF4-204ENST00000422344 SIVA1O15304 175 aa15.06■□□□□ 0
TRAF4-204ENST00000422344 NXPH4O95158 308 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms