RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 HIST1H1BP16401 226 aaKnown RBP0.35□□□□□ -2.35
LINC00397-201ENST00000422074 ADCYAP1P18509 176 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 POLR2JP52435 117 aaKnown RBP0.35□□□□□ -2.35
LINC00397-201ENST00000422074 OR8I2Q8N0Y5 310 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 DDA1Q9BW61 102 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 OVOS2A0A0G2JMS6 1433 aa0.35□□□□□ -2.35
LINC00397-201ENST00000422074 ZNF462Q96JM2 2506 aa0.34□□□□□ -2.35
LINC00397-201ENST00000422074 MED23Q9ULK4 1368 aa0.34□□□□□ -2.35
LINC00397-201ENST00000422074 DPM2O94777 84 aa0.34□□□□□ -2.36
LINC00397-201ENST00000422074 ASB16-AS1Q495Z4 193 aa0.34□□□□□ -2.36
LINC00397-201ENST00000422074 HSD17B12Q53GQ0 312 aa0.34□□□□□ -2.36
LINC00397-201ENST00000422074 SPINK6Q6UWN8 80 aa0.34□□□□□ -2.36
LINC00397-201ENST00000422074 DEFB132Q7Z7B7 95 aa0.34□□□□□ -2.36
LINC00397-201ENST00000422074 OR4S1Q8NGB4 309 aa0.34□□□□□ -2.36
LINC00397-201ENST00000422074 MYH1P12882 1939 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 RBBP6Q7Z6E9 1792 aaKnown RBP0.33□□□□□ -2.36
LINC00397-201ENST00000422074 TRAV17A0A0B4J275 112 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 APOC1P02654 83 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 TCRAP04437 139 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 SLC25A5P05141 298 aaKnown RBP0.33□□□□□ -2.36
LINC00397-201ENST00000422074 SLC35B3Q9H1N7 401 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 TMEM14BQ9NUH8 114 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 HSPB11Q9Y547 144 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 TANC2Q9HCD6 1990 aa0.33□□□□□ -2.36
LINC00397-201ENST00000422074 ZCCHC6Q5VYS8 1495 aaKnown RBP0.33□□□□□ -2.36
LINC00397-201ENST00000422074 AFDNP55196 1824 aaKnown RBP0.33□□□□□ -2.36
LINC00397-201ENST00000422074 LRP5O75197 1615 aa0.32□□□□□ -2.36
LINC00397-201ENST00000422074 TRBV10-1A0A0K0K1A3 114 aa0.32□□□□□ -2.36
LINC00397-201ENST00000422074 CCKP06307 115 aa0.32□□□□□ -2.36
LINC00397-201ENST00000422074 PAEPP09466 180 aa0.32□□□□□ -2.36
LINC00397-201ENST00000422074 KLKP1Q107X0 134 aa0.32□□□□□ -2.36
LINC00397-201ENST00000422074 DSCR8Q96T75 97 aa0.32□□□□□ -2.36
LINC00397-201ENST00000422074 METTL1Q9UBP6 276 aaKnown RBP0.32□□□□□ -2.36
LINC00397-201ENST00000422074 WDR97A6NE52 1622 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 PTPRGP23470 1445 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 BLMP54132 1417 aaPredicted RBP0.31□□□□□ -2.36
LINC00397-201ENST00000422074 ASH1LQ9NR48 2969 aaKnown RBP0.31□□□□□ -2.36
LINC00397-201ENST00000422074 SPTBP11277 2137 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 KRTAP2-3P0C7H8 128 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 PLGLB1Q02325 96 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 VPS25Q9BRG1 176 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 KRTAP2-4Q9BYR9 128 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 KRTAP2-1Q9BYU5 128 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 NDUFAF1Q9Y375 327 aa0.31□□□□□ -2.36
LINC00397-201ENST00000422074 DLEC1Q9Y238 1755 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 GNG14A0A1W2PPG7 69 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 H0YJX3 145 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 SMIM24O75264 130 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 PPP1R1CQ8WVI7 109 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 BANF2Q9H503 90 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 COA4Q9NYJ1 87 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 GINS2Q9Y248 185 aa0.3□□□□□ -2.36
LINC00397-201ENST00000422074 KIDINS220Q9ULH0 1771 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 TRAV36DV7A0A075B6V5 113 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 CMPK1P30085 196 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 AKR1D1P51857 326 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 OR8B8Q15620 311 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 PPDPFLQ8WWR9 84 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 MAGOHBQ96A72 148 aaKnown RBP0.29□□□□□ -2.36
LINC00397-201ENST00000422074 TAS2R8Q9NYW2 309 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 ARHGAP31Q2M1Z3 1444 aa0.29□□□□□ -2.36
LINC00397-201ENST00000422074 FRAS1Q86XX4 4008 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 TEX49A0A1B0GTD5 131 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 A0A1B0GW64 132 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 OR2H2O95918 312 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 RBP4P02753 201 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 MT-ND4LP03901 98 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 RPS28P62857 69 aaKnown RBP0.28□□□□□ -2.36
LINC00397-201ENST00000422074 TMEM141Q96I45 108 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 NAV3Q8IVL0 2385 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 CCDC171Q6TFL3 1326 aa0.28□□□□□ -2.36
LINC00397-201ENST00000422074 APCP25054 2843 aa0.28□□□□□ -2.37
LINC00397-201ENST00000422074 KDM6BO15054 1643 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 ZDBF2Q9HCK1 2354 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 BORCS7-ASMTA0A0B4J1R7 106 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 C9JAW5 83 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 MCRIP1C9JLW8 97 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 F2Z2F3 143 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 ZNF670-ZNF695F2Z2N8 137 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 MPC1LP0DKB6 136 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 SNX29P2Q8IUI4 249 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 TCTE3Q8IZS6 198 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 MRPL40Q9NQ50 206 aaKnown RBP0.27□□□□□ -2.37
LINC00397-201ENST00000422074 SPANXA1Q9NS26 97 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 SPANXCQ9NY87 97 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 CPDO75976 1380 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 MAST4O15021 2626 aa0.27□□□□□ -2.37
LINC00397-201ENST00000422074 XIRP1Q702N8 1843 aaKnown RBP0.27□□□□□ -2.37
LINC00397-201ENST00000422074 TRAV12-2A0A075B6T6 113 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 A0A1B0GX51 115 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 DEGS1O15121 323 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 YPEL1O60688 119 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 CCDC153Q494R4 210 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 Q5XG85 94 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 TMEM91Q6ZNR0 172 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 SLC25A26Q70HW3 274 aa0.26□□□□□ -2.37
LINC00397-201ENST00000422074 NOP16Q9Y3C1 178 aaKnown RBP0.26□□□□□ -2.37
LINC00397-201ENST00000422074 TRAV2A0A0B4J234 112 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 TCRBV3S1A0A5B6 114 aa0.25□□□□□ -2.37
LINC00397-201ENST00000422074 TFF1P04155 84 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms