RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 OVOL2Q9BRP0 275 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 NAGKQ9UJ70 344 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 TP53TG1Q9Y2A0 90 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 X6R8D5 127 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
TMEM53-206ENST00000420706 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 ZNF705GA8MUZ8 300 aaPredicted RBP9.03□□□□□ -0.96
TMEM53-206ENST00000420706 M0R036 132 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 GATCO43716 136 aaKnown RBP9.03□□□□□ -0.96
TMEM53-206ENST00000420706 P01737 135 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 APOC3P02656 99 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 HTN1P15515 57 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 AZU1P20160 251 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 RPL19P84098 196 aaKnown RBP9.03□□□□□ -0.96
TMEM53-206ENST00000420706 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 OR11H2Q8NH07 326 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 KCNS1Q96KK3 526 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 TM2D3Q9BRN9 247 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 TP53TG3Q9ULZ0 132 aa9.03□□□□□ -0.96
TMEM53-206ENST00000420706 SMIM9A6NGZ8 99 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 B4DEV8 164 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 TYMSP04818 313 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 C15orf54Q8N8G6 183 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 CLRN3Q8NCR9 226 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 OR2D3Q8NGH3 330 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 RETNQ9HD89 108 aa9.02□□□□□ -0.97
TMEM53-206ENST00000420706 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 GRIFINA4D1Z8 144 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 CBY3A6NI87 242 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 RPS20P60866 119 aaKnown RBP9.01□□□□□ -0.97
TMEM53-206ENST00000420706 RRN3P1Q2M238 152 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 RNF212Q495C1 297 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 DNLZQ5SXM8 178 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 ANAPC16Q96DE5 110 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 SPATA25Q9BR10 227 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 RPP21Q9H633 154 aaKnown RBP9.01□□□□□ -0.97
TMEM53-206ENST00000420706 V9GYV3 84 aa9.01□□□□□ -0.97
TMEM53-206ENST00000420706 TRGV11A0A075B6L2 103 aa9□□□□□ -0.97
TMEM53-206ENST00000420706 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
TMEM53-206ENST00000420706 CXCL1P09341 107 aa9□□□□□ -0.97
TMEM53-206ENST00000420706 SVBPQ8N300 66 aa9□□□□□ -0.97
TMEM53-206ENST00000420706 MDFICQ9P1T7 246 aa9□□□□□ -0.97
TMEM53-206ENST00000420706 C7orf77A4D0Y5 90 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 PPP1R2P9O14990 202 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 SNAPINO95295 136 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 MT-ND4LP03901 98 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 GZMBP10144 247 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 MIFP14174 115 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 CT83Q5H943 113 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 ZNF493Q6ZR52 646 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
TMEM53-206ENST00000420706 RNASE8Q8TDE3 154 aaKnown RBP8.99□□□□□ -0.97
TMEM53-206ENST00000420706 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
TMEM53-206ENST00000420706 PLAC8L1A1L4L8 177 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 XKRY2A2RUG3 117 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 A8MWL6 223 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 RNASE3P12724 160 aaKnown RBP8.98□□□□□ -0.97
TMEM53-206ENST00000420706 ASIPP42127 132 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 Q8NAQ8 132 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 ZMAT4Q9H898 229 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 GSN-AS1Q9NRJ2 163 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
TMEM53-206ENST00000420706 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 ARMS2P0C7Q2 107 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 IGLC6P0CF74 106 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 NHLRC4P0CG21 123 aaPredicted RBP8.97□□□□□ -0.97
TMEM53-206ENST00000420706 S100A4P26447 101 aaKnown RBP8.97□□□□□ -0.97
TMEM53-206ENST00000420706 FOXA3P55318 350 aaPredicted RBP8.97□□□□□ -0.97
TMEM53-206ENST00000420706 RHEBQ15382 184 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 TSKUQ8WUA8 353 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
TMEM53-206ENST00000420706 CTDSP1Q9GZU7 261 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 RPS10P5Q9NQ39 176 aa8.97□□□□□ -0.97
TMEM53-206ENST00000420706 A0A087WWC5 75 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 FAM231BA6NCW3 169 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 SNAI2O43623 268 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 MED14OSP0DP75 135 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 TCL1AP56279 114 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 ZNF415Q09FC8 603 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 ATRAIDQ6UW56 229 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 IL17DQ8TAD2 202 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 GTSF1Q8WW33 167 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 GFRA4Q9GZZ7 299 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 SCRT2Q9NQ03 307 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 IL36BQ9NZH7 164 aa8.96□□□□□ -0.98
TMEM53-206ENST00000420706 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 SNURFLB1AK76 121 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 H3BVH4 76 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 DEFB4AO15263 64 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 OR5AL1P0C617 328 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 S100A1P23297 94 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 FER1L6-AS1Q8NA97 138 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 SPXQ9BT56 116 aa8.95□□□□□ -0.98
TMEM53-206ENST00000420706 TMEM242Q9NWH2 141 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms