RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 Q6ZTI0 123 aa12.48□□□□□ -0.41
EPCAM-203ENST00000419334 TMEM183AQ8IXX5 376 aa12.48□□□□□ -0.41
EPCAM-203ENST00000419334 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
EPCAM-203ENST00000419334 SDF2L1Q9HCN8 221 aa12.48□□□□□ -0.41
EPCAM-203ENST00000419334 APLNQ9ULZ1 77 aa12.48□□□□□ -0.41
EPCAM-203ENST00000419334 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 SPINK4O60575 86 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 GAGE7O76087 117 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 TYMSP04818 313 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 C18orf15Q96N68 181 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 MDFICQ9P1T7 246 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 C11orf21Q9P2W6 132 aa12.47□□□□□ -0.41
EPCAM-203ENST00000419334 BCL2P10415 239 aa12.46□□□□□ -0.41
EPCAM-203ENST00000419334 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.41
EPCAM-203ENST00000419334 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.41
EPCAM-203ENST00000419334 LYPD6BQ8NI32 183 aa12.46□□□□□ -0.41
EPCAM-203ENST00000419334 ZC2HC1AQ96GY0 325 aa12.46□□□□□ -0.41
EPCAM-203ENST00000419334 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 GNRH2O43555 120 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 LINC00476Q8WZB0 136 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 LYSTQ99698 3801 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 SPXQ9BT56 116 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 NDUFAF3Q9BU61 184 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 VAX2Q9UIW0 290 aa12.45□□□□□ -0.42
EPCAM-203ENST00000419334 PDE6DO43924 150 aa12.44□□□□□ -0.42
EPCAM-203ENST00000419334 TRGV2A0A075B6R0 118 aa12.43□□□□□ -0.42
EPCAM-203ENST00000419334 F5H768 121 aa12.43□□□□□ -0.42
EPCAM-203ENST00000419334 CRIP1P50238 77 aa12.43□□□□□ -0.42
EPCAM-203ENST00000419334 FAM162BQ5T6X4 162 aa12.43□□□□□ -0.42
EPCAM-203ENST00000419334 MLST8Q9BVC4 326 aa12.43□□□□□ -0.42
EPCAM-203ENST00000419334 MRPL16Q9NX20 251 aaKnown RBP12.43□□□□□ -0.42
EPCAM-203ENST00000419334 MUC4Q99102 2169 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
EPCAM-203ENST00000419334 PLECQ15149 4684 aaKnown RBP12.42□□□□□ -0.42
EPCAM-203ENST00000419334 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 LGALS9CQ6DKI2 356 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 TMEM88Q6PEY1 159 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
EPCAM-203ENST00000419334 SH2D1AO60880 128 aa12.41□□□□□ -0.42
EPCAM-203ENST00000419334 NHLRC2Q8NBF2 726 aa12.41□□□□□ -0.42
EPCAM-203ENST00000419334 RASL10AQ92737 203 aa12.41□□□□□ -0.42
EPCAM-203ENST00000419334 M0R2P5 195 aa12.4□□□□□ -0.42
EPCAM-203ENST00000419334 LY6G6CO95867 125 aa12.4□□□□□ -0.42
EPCAM-203ENST00000419334 TEX261Q6UWH6 196 aa12.4□□□□□ -0.42
EPCAM-203ENST00000419334 C15orf53Q8NAA6 179 aa12.4□□□□□ -0.42
EPCAM-203ENST00000419334 C9orf85Q96MD7 179 aa12.4□□□□□ -0.42
EPCAM-203ENST00000419334 ALMS1Q8TCU4 4167 aa12.39□□□□□ -0.43
EPCAM-203ENST00000419334 ORM1P02763 201 aa12.39□□□□□ -0.43
EPCAM-203ENST00000419334 RNASE3P12724 160 aaKnown RBP12.39□□□□□ -0.43
EPCAM-203ENST00000419334 HOXA5P20719 270 aa12.39□□□□□ -0.43
EPCAM-203ENST00000419334 MED9Q9NWA0 146 aa12.39□□□□□ -0.43
EPCAM-203ENST00000419334 RBFOX3A6NFN3 312 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 B4DEV8 164 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 KRBOX1C9JBD0 128 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 OR5I1Q13606 314 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 LINC01559Q495D7 138 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 ZNF506Q5JVG8 444 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 SMIM12Q96EX1 92 aa12.38□□□□□ -0.43
EPCAM-203ENST00000419334 M0R036 132 aa12.37□□□□□ -0.43
EPCAM-203ENST00000419334 ASIPP42127 132 aa12.37□□□□□ -0.43
EPCAM-203ENST00000419334 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
EPCAM-203ENST00000419334 S100A4P26447 101 aaKnown RBP12.36□□□□□ -0.43
EPCAM-203ENST00000419334 GNG4P50150 75 aa12.36□□□□□ -0.43
EPCAM-203ENST00000419334 PTH2Q96A98 100 aa12.36□□□□□ -0.43
EPCAM-203ENST00000419334 IL36BQ9NZH7 164 aa12.36□□□□□ -0.43
EPCAM-203ENST00000419334 NACAE9PAV3 2078 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 TRBV20OR9-2A0A075B6H5 130 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 TRAV4A0A0B4J268 109 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 RAB19A4D1S5 217 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 TMEM250H0YL14 139 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 H3BNG1 76 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 NDUFS6O75380 124 aaKnown RBP12.35□□□□□ -0.43
EPCAM-203ENST00000419334 P0DMU3 169 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 FAM210AQ96ND0 272 aa12.35□□□□□ -0.43
EPCAM-203ENST00000419334 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 TOR2AQ5JU69 321 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 PRR27Q6MZM9 219 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 ZNF575Q86XF7 245 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 SACSQ9NZJ4 4579 aa12.34□□□□□ -0.43
EPCAM-203ENST00000419334 A0A0J9YY99 117 aa12.33□□□□□ -0.44
EPCAM-203ENST00000419334 C9JCJ5 164 aa12.33□□□□□ -0.44
EPCAM-203ENST00000419334 H3BVH4 76 aa12.33□□□□□ -0.44
EPCAM-203ENST00000419334 NUDT3O95989 172 aa12.33□□□□□ -0.44
EPCAM-203ENST00000419334 CXCL1P09341 107 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms