RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TNFRSF6BO95407 300 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 S100A4P26447 101 aaKnown RBP10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 TSPOP30536 169 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 LGALS9BQ3B8N2 356 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 LGALS9CQ6DKI2 356 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 LCNL1Q6ZST4 164 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SVEP1Q4LDE5 3571 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 CSMD1Q96PZ7 3565 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 FBN2P35556 2912 aa10.97□□□□□ -0.65
HLA-DPA1-242ENST00000419277 M0R381 172 aa10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 HNRNPA3P51991 378 aaKnown RBP10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 Q8N8P6 123 aa10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 MAPK1IP1LQ8NDC0 245 aa10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 SNHG12Q9BXW3 62 aa10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 PEMTQ9UBM1 199 aa10.96□□□□□ -0.65
HLA-DPA1-242ENST00000419277 VPS13CQ709C8 3753 aa10.96□□□□□ -0.66
HLA-DPA1-242ENST00000419277 H3BVH4 76 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 K7EQG2 157 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 PRB4P10163 310 aaPredicted RBP10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 HOXD3P31249 432 aaPredicted RBP10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 PRR9Q5T870 116 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 C4orf3Q8WVX3 66 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 DPH3P1Q9H4G8 78 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 LINC01549A6NIU2 74 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 MSRB1Q9NZV6 116 aa10.95□□□□□ -0.66
HLA-DPA1-242ENST00000419277 A0A096LNJ9 63 aa10.94□□□□□ -0.66
HLA-DPA1-242ENST00000419277 FCER1GP30273 86 aa10.94□□□□□ -0.66
HLA-DPA1-242ENST00000419277 FAM159AQ6UWV7 190 aa10.94□□□□□ -0.66
HLA-DPA1-242ENST00000419277 Q6ZN92 141 aa10.94□□□□□ -0.66
HLA-DPA1-242ENST00000419277 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
HLA-DPA1-242ENST00000419277 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
HLA-DPA1-242ENST00000419277 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
HLA-DPA1-242ENST00000419277 IGLL1P15814 213 aa10.93□□□□□ -0.66
HLA-DPA1-242ENST00000419277 FOXI2Q6ZQN5 318 aa10.93□□□□□ -0.66
HLA-DPA1-242ENST00000419277 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
HLA-DPA1-242ENST00000419277 IGHV4OR15-8A0A075B7B6 117 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 A0A087WW49 117 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 A0A0J9YX75 114 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 J3QKU1 62 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 EREGO14944 169 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 ATP5LO75964 103 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 EVI2AP22794 236 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 SYNJ2BPP57105 145 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 SSTP61278 116 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 ANXA2RQ3ZCQ2 193 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 OR1N2Q8NGR9 330 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 IFI27L1Q96BM0 104 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 POLQO75417 2590 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 CENPEQ02224 2701 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 MUC21A0A0G2JKD1 596 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 MUC21A0A140T8X8 626 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 C7orf71A4D174 169 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 LINC01619G3V211 115 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 NCR2O95944 276 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 G0S2P27469 103 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 NUTF2P61970 127 aaKnown RBP10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 PRR31Q5SQ13 230 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 MUC21Q5SSG8 566 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
HLA-DPA1-242ENST00000419277 ABCA12Q86UK0 2595 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 CDKN1BP46527 198 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 KIR3DS1Q14943 382 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 COL5A1-AS1Q5SY13 56 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 LINC00173Q6ZV60 143 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 ATOH7Q8N100 152 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 NRACQ8N912 160 aa10.91□□□□□ -0.66
HLA-DPA1-242ENST00000419277 IGLV2-18A0A075B6J9 118 aa10.9□□□□□ -0.66
HLA-DPA1-242ENST00000419277 ORMDL2Q53FV1 153 aa10.9□□□□□ -0.66
HLA-DPA1-242ENST00000419277 SLC25A34Q6PIV7 304 aa10.9□□□□□ -0.66
HLA-DPA1-242ENST00000419277 FOXC2Q99958 501 aa10.9□□□□□ -0.66
HLA-DPA1-242ENST00000419277 GOLT1BQ9Y3E0 138 aa10.9□□□□□ -0.66
HLA-DPA1-242ENST00000419277 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SMKR1H3BMG3 65 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 LAGE3Q14657 143 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 C10orf99Q6UWK7 81 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 MAP1AP78559 2803 aaPredicted RBP10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 A8MTW9 85 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 F6UB75 175 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SYT8Q8NBV8 401 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
HLA-DPA1-242ENST00000419277 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
HLA-DPA1-242ENST00000419277 PLA2G2AP14555 144 aa10.88□□□□□ -0.67
HLA-DPA1-242ENST00000419277 APCP25054 2843 aa10.88□□□□□ -0.67
HLA-DPA1-242ENST00000419277 CD5LO43866 347 aa10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 SUMO2P61956 95 aaKnown RBP10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TCTEX1D4Q5JR98 221 aa10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 OR9G4Q8NGQ1 327 aa10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TRGV11A0A075B6L2 103 aa10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 A0A1B0GV90 55 aa10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
HLA-DPA1-242ENST00000419277 ZANQ9Y493 2812 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 TRAV25A0A0B4J276 109 aa10.86□□□□□ -0.67
HLA-DPA1-242ENST00000419277 J3KRW8 73 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms