RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 SPG11Q96JI7 2443 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 IGHV3OR16-10A0A075B7F0 116 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 TRAV8-2A0A0B4J237 113 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 NPFFR1Q9GZQ6 430 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 IGF1P05019 195 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 FBXL19-AS1Q494R0 122 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 MAPKAPK5-AS1Q8N8E1 139 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 EEF1AKMT3Q96AZ1 226 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.63□□□□□ -0.559e-13■■■□□ 14.7
SEMA3B-203ENST00000419007 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 G3V4G9 280 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 DEFB1P60022 68 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 ADORA2A-AS1P86434 159 aa11.63□□□□□ -0.55
SEMA3B-203ENST00000419007 IGHV7-4-1A0A0J9YVY3 117 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 IGLV2-18A0A075B6J9 118 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 S100A4P26447 101 aaKnown RBP11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 NRACQ8N912 160 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 SIRPDQ9H106 197 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 CEND1Q8N111 149 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 HIST1H4GQ99525 98 aa11.62□□□□□ -0.55
SEMA3B-203ENST00000419007 SRSF1Q07955 248 aaKnown RBP eCLIP11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 PSMG3-AS1Q96PY0 264 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 DEFB104AQ8WTQ1 72 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 UBTD1Q9HAC8 227 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 KLRB1Q12918 225 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 PRR9Q5T870 116 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 NEGR1Q7Z3B1 354 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 CLUHP3Q96NS8 147 aa11.61□□□□□ -0.55
SEMA3B-203ENST00000419007 ZNF462Q96JM2 2506 aa11.6□□□□□ -0.55
SEMA3B-203ENST00000419007 LINC01546A6NGU7 62 aa11.6□□□□□ -0.55
SEMA3B-203ENST00000419007 ATP5G2Q06055 141 aa11.6□□□□□ -0.55
SEMA3B-203ENST00000419007 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
SEMA3B-203ENST00000419007 FLNCQ14315 2725 aa11.6□□□□□ -0.55
SEMA3B-203ENST00000419007 MGPP08493 103 aa11.6□□□□□ -0.55
SEMA3B-203ENST00000419007 TEX48A0A1B0GUV7 120 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 UBE2E1P51965 193 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 MTURNQ8N3F0 131 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 GLMPQ8WWB7 406 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 A0A087WX48 190 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 A0A1W2PPR1 153 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 C14orf178Q8N769 122 aaPredicted RBP11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 SCGB3A1Q96QR1 104 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 FAM208BQ5VWN6 2430 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 LCNL1Q6ZST4 164 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 ZFHX3Q15911 3703 aa11.59□□□□□ -0.55
SEMA3B-203ENST00000419007 TRBV7-1A0A0A6YYK4 115 aa11.58□□□□□ -0.56
SEMA3B-203ENST00000419007 ZNF479Q96JC4 524 aa11.58□□□□□ -0.56
SEMA3B-203ENST00000419007 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
SEMA3B-203ENST00000419007 SCGB2A2Q13296 93 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 AMTNQ6UX39 209 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 C9orf47Q6ZRZ4 202 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 RPL39LQ96EH5 51 aaKnown RBP11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 C20orf173Q96LM9 149 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 PHLDA3Q9Y5J5 127 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 CENPVL3A0A0U1RRI6 287 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 PLNP26678 52 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 TM2D2Q9BX73 214 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 PRORYQ9H606 182 aa11.57□□□□□ -0.56
SEMA3B-203ENST00000419007 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 H3BMG7 143 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 OR11H1Q8NG94 326 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 OR11H2Q8NH07 326 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 CENPEQ02224 2701 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 IGHV3-11P01762 117 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 ARL3P36405 182 aa11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 PHLDA1Q8WV24 401 aaPredicted RBP11.56□□□□□ -0.56
SEMA3B-203ENST00000419007 IGLL5B9A064 214 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 F6UB75 175 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 H7C1H1 209 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 NPFFO15130 113 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 TRBV12-3P01733 135 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 C12orf74Q32Q52 190 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 UNQ9165/PRO28630Q6UXU0 137 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 OR10J6PQ8NGY7 276 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 CYSLTR1Q9Y271 337 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 CREBBPQ92793 2442 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 RNASE4P34096 147 aaKnown RBP11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 SUMO2P61956 95 aaKnown RBP11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 F8VRH5 84 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 CHD6Q8TD26 2715 aa11.55□□□□□ -0.56
SEMA3B-203ENST00000419007 C5orf56Q8N8D9 126 aa11.54□□□□□ -0.56
SEMA3B-203ENST00000419007 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
SEMA3B-203ENST00000419007 TMEM238C9JI98 176 aa11.54□□□□□ -0.56
SEMA3B-203ENST00000419007 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
SEMA3B-203ENST00000419007 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
SEMA3B-203ENST00000419007 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
SEMA3B-203ENST00000419007 ASIPP42127 132 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms