RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 LECT2O14960 151 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 OR10J4P0C629 311 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 RHOHQ15669 191 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 LINC01620Q4KN68 170 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 MIR17HGQ75NE6 70 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 TMEM252Q8N6L7 170 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 Q8N976 141 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 ATP6V0E2Q8NHE4 81 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 FXYD5Q96DB9 178 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 KCNS1Q96KK3 526 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 C2orf50Q96LR7 162 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 NPCDR1Q9BY65 106 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 C11orf1Q9H5F2 150 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 LYRM2Q9NU23 88 aaPredicted RBP5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
HLA-DPA1-241ENST00000417724 TRAV21A0A0B4J279 112 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 IGSF23A1L1A6 192 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 DIRC3C9JPN6 131 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 RS1O15537 224 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 ZNF876PQ49A33 203 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 TMED6Q8WW62 240 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 BAALCQ8WXS3 180 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 RMI2Q96E14 147 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 PHYHIPLQ96FC7 376 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 SDF2L1Q9HCN8 221 aa5.17□□□□□ -1.58
HLA-DPA1-241ENST00000417724 GGTLC3B5MD39 225 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 OR7C2O60412 319 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 IGLV2-8P01709 118 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 S100A10P60903 97 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 CFAP126Q5VTH2 177 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 CIRBP-AS1Q8TBR5 109 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 ASB13Q8WXK3 278 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 KCNIP2Q9NS61 270 aa5.16□□□□□ -1.58
HLA-DPA1-241ENST00000417724 A0A087WWC5 75 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TRAV8-1A0A0A6YYK1 113 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 IGHV3-73A0A0B4J1V6 119 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 RNF222A6NCQ9 220 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TYMSP04818 313 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SEC11BP0C7V7 166 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 MGST1P10620 155 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 BTCP35070 178 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 UBE2L3P68036 154 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 RAB32Q13637 225 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 FAM74A1Q5RGS3 127 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 DAZ4Q86SG3 579 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 Q8N3U1 123 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 CMTM2Q8TAZ6 248 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 THAP6Q8TBB0 222 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 HYLS1Q96M11 299 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 NMES1Q9C002 83 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TREM1Q9NP99 234 aa5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 DAZ3Q9NR90 486 aaKnown RBP5.15□□□□□ -1.59
HLA-DPA1-241ENST00000417724 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 LRP1Q07954 4544 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PGPA6NDG6 321 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 CCDC160A6NGH7 325 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 C17orf112F2Z3M2 114 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 IGLV2-11P01706 119 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 NHLH2Q02577 135 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 IL15RAQ13261 267 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 ARL6IP6Q8N6S5 226 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 OR5C1Q8NGR4 320 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 OTORQ9NRC9 128 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 URGCP-MRPS24S4R325 110 aa5.14□□□□□ -1.59
HLA-DPA1-241ENST00000417724 DNAH8Q96JB1 4490 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 IGKV2D-24A0A075B6R9 120 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TCRBP04435 133 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TAS2R45P59539 299 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 RPL37AP61513 92 aaKnown RBP5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 KHDC3LQ587J8 217 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 DPPA3Q6W0C5 159 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GOLT1AQ6ZVE7 132 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PTH2Q96A98 100 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SEC22CQ9BRL7 303 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 WDR61Q9GZS3 305 aaKnown RBP5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 MBD2Q9UBB5 411 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 RPH3ALQ9UNE2 315 aa5.13□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TRAV6A0A075B6T7 132 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GAGE12JA6NER3 117 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PGPEP1LA6NFU8 196 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 F6UZH7 168 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TAAR5O14804 337 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 IL7P13232 177 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 FGF8P55075 233 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GAGE1Q13065 139 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GAGE4Q13068 117 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GAGE5Q13069 117 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 ELOBQ15370 118 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GAGE13Q4V321 117 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 C14orf177Q52M58 125 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 ZNF506Q5JVG8 444 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 ZFP2Q6ZN57 461 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 CYB561D1Q8N8Q1 229 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 OR10G9Q8NGN4 311 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 TVP23CQ96ET8 276 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 C9orf85Q96MD7 179 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SDHCQ99643 169 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 NDFIP1Q9BT67 221 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 301.5 ms