RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 GSN-AS1Q9NRJ2 163 aa12.44□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 KMT2CQ8NEZ4 4911 aaKnown RBP12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 DEFB131BA0A096LNP1 70 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 SPINK4O60575 86 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 CRIP1P50238 77 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 ZNF415Q09FC8 603 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 ZNF767PQ75MW2 155 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 C11orf21Q9P2W6 132 aa12.43□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 ZNF506Q5JVG8 444 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 SPXQ9BT56 116 aa12.42□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 IGHV3-16A0A0C4DH30 117 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 GNRH2O43555 120 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 TYMSP04818 313 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 FAM162BQ5T6X4 162 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 SMIM12Q96EX1 92 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 MDFICQ9P1T7 246 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 NAGKQ9UJ70 344 aa12.41□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 TMEM250H0YL14 139 aa12.4□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 ATP5G1P05496 136 aa12.4□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 MED9Q9NWA0 146 aa12.4□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 IGKV3D-20A0A0C4DH25 116 aa12.39□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 RASL10AQ92737 203 aa12.39□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 FAM210AQ96ND0 272 aa12.39□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 DERL1Q9BUN8 251 aa12.39□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 LYSTQ99698 3801 aa12.38□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 SH2D1AO60880 128 aa12.38□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 Q6ZTI0 123 aa12.38□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 PTH2Q96A98 100 aa12.38□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 TRGV1A0A0A0MS02 117 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 GAGE12BA1L429 117 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 GAGE7O76087 117 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 DNAH1Q9P2D7 4330 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 IGLL5B9A064 214 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 KRBOX1C9JBD0 128 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 M0R2P5 195 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 ZNF575Q86XF7 245 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 C9orf85Q96MD7 179 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 NDUFAF3Q9BU61 184 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 APLNQ9ULZ1 77 aa12.36□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 IGHV4-4A0A075B6R2 117 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 RAB19A4D1S5 217 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 B4DEV8 164 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 C9JCJ5 164 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 ORM1P02763 201 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 RNASE3P12724 160 aaKnown RBP12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 GNG4P50150 75 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 TOR2AQ5JU69 321 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 NHLRC2Q8NBF2 726 aa12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 TRBV20OR9-2A0A075B6H5 130 aa12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 TRGV2A0A075B6R0 118 aa12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 CXCL1P09341 107 aa12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 BIN3Q9NQY0 253 aa12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 MRPL16Q9NX20 251 aaKnown RBP12.34□□□□□ -0.43
COMMD3-BMI1-201ENST00000417470 HTN3P15516 51 aa12.33□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 ASIPP42127 132 aa12.33□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 IL36BQ9NZH7 164 aa12.33□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 LCE6AA0A183 80 aa12.32□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 F5H768 121 aa12.32□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 PARLQ9H300 379 aa12.32□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 ALMS1Q8TCU4 4167 aa12.32□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 C19orf71A6NCJ1 209 aa12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 SRP19P09132 144 aaKnown RBP12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 S100A4P26447 101 aaKnown RBP12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 PCNPQ8WW12 178 aaKnown RBP12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 VPS13DQ5THJ4 4388 aa12.31□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 H3BNG1 76 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 M0R036 132 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 CIDEAO60543 219 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 HOXA5P20719 270 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 SLAQ13239 276 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 LGALS9CQ6DKI2 356 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 TMEM88Q6PEY1 159 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 SCRT2Q9NQ03 307 aa12.3□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
COMMD3-BMI1-201ENST00000417470 RAB14P61106 215 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms