RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 COX8CQ7Z4L0 72 aa16.38■□□□□ 0.21
SMARCB1-205ENST00000417137 FAM210BQ96KR6 192 aa16.38■□□□□ 0.21
SMARCB1-205ENST00000417137 GAGE12BA1L429 117 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 GAGE7O76087 117 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 GAGE12FP0CL80 117 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 GAGE12GP0CL81 117 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 GAGE12IP0CL82 117 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 LINC00612Q8N6U2 182 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 SPXQ9BT56 116 aa16.37■□□□□ 0.21
SMARCB1-205ENST00000417137 TRGV1A0A0A0MS02 117 aa16.36■□□□□ 0.21
SMARCB1-205ENST00000417137 GNRH2O43555 120 aa16.36■□□□□ 0.21
SMARCB1-205ENST00000417137 LGALS9BQ3B8N2 356 aa16.36■□□□□ 0.21
SMARCB1-205ENST00000417137 LYPD6BQ8NI32 183 aa16.36■□□□□ 0.21
SMARCB1-205ENST00000417137 C11orf52Q96A22 123 aa16.36■□□□□ 0.21
SMARCB1-205ENST00000417137 MDFICQ9P1T7 246 aa16.36■□□□□ 0.21
SMARCB1-205ENST00000417137 SPINK4O60575 86 aa16.35■□□□□ 0.21
SMARCB1-205ENST00000417137 FAM162BQ5T6X4 162 aa16.35■□□□□ 0.21
SMARCB1-205ENST00000417137 Q6ZTI0 123 aa16.35■□□□□ 0.21
SMARCB1-205ENST00000417137 BAGE2Q86Y30 109 aa16.35■□□□□ 0.21
SMARCB1-205ENST00000417137 TRGV2A0A075B6R0 118 aa16.34■□□□□ 0.21
SMARCB1-205ENST00000417137 IGHV4-4A0A075B6R2 117 aa16.34■□□□□ 0.21
SMARCB1-205ENST00000417137 TYMSP04818 313 aa16.34■□□□□ 0.21
SMARCB1-205ENST00000417137 TEX261Q6UWH6 196 aa16.34■□□□□ 0.21
SMARCB1-205ENST00000417137 ZC2HC1AQ96GY0 325 aa16.34■□□□□ 0.21
SMARCB1-205ENST00000417137 NDUFAF3Q9BU61 184 aa16.34■□□□□ 0.21
SMARCB1-205ENST00000417137 CSMD3Q7Z407 3707 aa16.33■□□□□ 0.21
SMARCB1-205ENST00000417137 IGHV3-16A0A0C4DH30 117 aa16.33■□□□□ 0.2
SMARCB1-205ENST00000417137 F5H768 121 aa16.33■□□□□ 0.2
SMARCB1-205ENST00000417137 RPL35P42766 123 aaKnown RBP16.33■□□□□ 0.2
SMARCB1-205ENST00000417137 MED9Q9NWA0 146 aa16.33■□□□□ 0.2
SMARCB1-205ENST00000417137 C11orf21Q9P2W6 132 aa16.33■□□□□ 0.2
SMARCB1-205ENST00000417137 LCE6AA0A183 80 aa16.32■□□□□ 0.2
SMARCB1-205ENST00000417137 C18orf15Q96N68 181 aa16.32■□□□□ 0.2
SMARCB1-205ENST00000417137 RBFOX3A6NFN3 312 aa16.31■□□□□ 0.2
SMARCB1-205ENST00000417137 ORM1P02763 201 aa16.31■□□□□ 0.2
SMARCB1-205ENST00000417137 ZNF674Q2M3X9 581 aa16.31■□□□□ 0.2
SMARCB1-205ENST00000417137 APLNQ9ULZ1 77 aa16.31■□□□□ 0.2
SMARCB1-205ENST00000417137 STARD9Q9P2P6 4700 aa16.31■□□□□ 0.2
SMARCB1-205ENST00000417137 SH2D1AO60880 128 aa16.3■□□□□ 0.2
SMARCB1-205ENST00000417137 CRIP1P50238 77 aa16.3■□□□□ 0.2
SMARCB1-205ENST00000417137 NHLRC2Q8NBF2 726 aa16.3■□□□□ 0.2
SMARCB1-205ENST00000417137 MRPL16Q9NX20 251 aaKnown RBP16.3■□□□□ 0.2
SMARCB1-205ENST00000417137 B4DEV8 164 aa16.29■□□□□ 0.2
SMARCB1-205ENST00000417137 M0R2P5 195 aa16.29■□□□□ 0.2
SMARCB1-205ENST00000417137 RASL10AQ92737 203 aa16.29■□□□□ 0.2
SMARCB1-205ENST00000417137 MLST8Q9BVC4 326 aa16.29■□□□□ 0.2
SMARCB1-205ENST00000417137 IGKV3D-20A0A0C4DH25 116 aa16.28■□□□□ 0.2
SMARCB1-205ENST00000417137 S100A4P26447 101 aaKnown RBP16.28■□□□□ 0.2
SMARCB1-205ENST00000417137 DERL1Q9BUN8 251 aa16.28■□□□□ 0.2
SMARCB1-205ENST00000417137 ASIPP42127 132 aa16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 GNG4P50150 75 aa16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 OR5I1Q13606 314 aa16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 ZNF506Q5JVG8 444 aa16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 TMEM88Q6PEY1 159 aa16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 SMIM12Q96EX1 92 aa16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 EIF5A2Q9GZV4 153 aaKnown RBP16.27■□□□□ 0.2
SMARCB1-205ENST00000417137 TENM2Q9NT68 2774 aa16.26■□□□□ 0.19
SMARCB1-205ENST00000417137 CENPWQ5EE01 88 aa16.26■□□□□ 0.19
SMARCB1-205ENST00000417137 C15orf53Q8NAA6 179 aa16.26■□□□□ 0.19
SMARCB1-205ENST00000417137 RAB19A4D1S5 217 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 KRBOX1C9JBD0 128 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 TMEM250H0YL14 139 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 M0R036 132 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 LY6G6CO95867 125 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 LINC01559Q495D7 138 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 LGALS9CQ6DKI2 356 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 LINC00476Q8WZB0 136 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 RYR2Q92736 4967 aa16.25■□□□□ 0.19
SMARCB1-205ENST00000417137 C9orf85Q96MD7 179 aa16.24■□□□□ 0.19
SMARCB1-205ENST00000417137 FAM210AQ96ND0 272 aa16.24■□□□□ 0.19
SMARCB1-205ENST00000417137 BIN3Q9NQY0 253 aa16.24■□□□□ 0.19
SMARCB1-205ENST00000417137 DYNC2H1Q8NCM8 4307 aaKnown RBP16.24■□□□□ 0.19
SMARCB1-205ENST00000417137 NDUFS6O75380 124 aaKnown RBP16.23■□□□□ 0.19
SMARCB1-205ENST00000417137 TOR2AQ5JU69 321 aa16.23■□□□□ 0.19
SMARCB1-205ENST00000417137 DNLZQ5SXM8 178 aa16.23■□□□□ 0.19
SMARCB1-205ENST00000417137 PRR27Q6MZM9 219 aa16.23■□□□□ 0.19
SMARCB1-205ENST00000417137 PTH2Q96A98 100 aa16.23■□□□□ 0.19
SMARCB1-205ENST00000417137 MGST1P10620 155 aaKnown RBP16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 RNASE3P12724 160 aaKnown RBP16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 HOXA5P20719 270 aa16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 SLAQ13239 276 aa16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 ZNF876PQ49A33 203 aa16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 DAZAP1Q96EP5 407 aaKnown RBP16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 IL36BQ9NZH7 164 aa16.22■□□□□ 0.19
SMARCB1-205ENST00000417137 C9JCJ5 164 aa16.21■□□□□ 0.19
SMARCB1-205ENST00000417137 IGHV3-53P01767 116 aa16.21■□□□□ 0.19
SMARCB1-205ENST00000417137 OR4C5Q8NGB2 326 aa16.21■□□□□ 0.19
SMARCB1-205ENST00000417137 TRAV26-1A0A087WT03 109 aa16.2■□□□□ 0.18
SMARCB1-205ENST00000417137 TRAV4A0A0B4J268 109 aa16.2■□□□□ 0.18
SMARCB1-205ENST00000417137 P0DMU3 169 aa16.2■□□□□ 0.18
SMARCB1-205ENST00000417137 FAM231AP0DMU4 169 aa16.2■□□□□ 0.18
SMARCB1-205ENST00000417137 FAM231CP0DMU5 169 aa16.2■□□□□ 0.18
SMARCB1-205ENST00000417137 TMSB15BA0A087X1C1 80 aa16.19■□□□□ 0.18
SMARCB1-205ENST00000417137 GRIFINA4D1Z8 144 aa16.19■□□□□ 0.18
SMARCB1-205ENST00000417137 H3BNG1 76 aa16.19■□□□□ 0.18
SMARCB1-205ENST00000417137 IGLV2-8P01709 118 aa16.19■□□□□ 0.18
SMARCB1-205ENST00000417137 PCNPQ8WW12 178 aaKnown RBP16.19■□□□□ 0.18
SMARCB1-205ENST00000417137 PARLQ9H300 379 aa16.19■□□□□ 0.18
SMARCB1-205ENST00000417137 TRGV4A0A0C4DH28 118 aa16.18■□□□□ 0.18
SMARCB1-205ENST00000417137 CIDEAO60543 219 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1022.5 ms