RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 TCL1BO95988 128 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 CD40P25942 277 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 LY6DQ14210 128 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 C3orf36Q3SXR2 165 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 PLEKHB2Q96CS7 222 aa11.41□□□□□ -0.58
NCKIPSD-204ENST00000416649 LYNX1G3V0Z9 82 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 CCDC179H3BU77 68 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 LYNX1P0DP58 116 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 GRNP28799 593 aaKnown RBP11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 BSPH1Q075Z2 132 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 ERCC8Q13216 396 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 LYPD2Q6UXB3 125 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 KLHL30-AS1Q8NEE0 82 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 CENPEQ02224 2701 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 F8VRH5 84 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 H7C1H1 209 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 FCN3O75636 299 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 IGHV3-23P01764 117 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 GATA4P43694 442 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 GAGE2EQ4V326 116 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.58
NCKIPSD-204ENST00000416649 CFAP46Q8IYW2 2715 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 MYO18BQ8IUG5 2567 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 SLC25A16P16260 332 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 SCGB3A1Q96QR1 104 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 MRPS12O15235 138 aaKnown RBP11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 SNCGO76070 127 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 NHLRC4P0CG21 123 aaPredicted RBP11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 DEFB104AQ8WTQ1 72 aa11.39□□□□□ -0.59
NCKIPSD-204ENST00000416649 FABP5P3A8MUU1 101 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 H7C2G1 150 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 K7EIM0 57 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 NDUFB3O43676 98 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 IGLV2-18A0A075B6J9 118 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 EMP1P54849 157 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
NCKIPSD-204ENST00000416649 HRNRQ86YZ3 2850 aaPredicted RBP11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 FLNCQ14315 2725 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 TRAV4A0A0B4J268 109 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 GAGE12JA6NER3 117 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 GAGE7O76087 117 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 GAGE4Q13068 117 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 LYRM7Q5U5X0 104 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 C1orf122Q6ZSJ8 110 aa11.37□□□□□ -0.59
NCKIPSD-204ENST00000416649 IGLV3-9A0A075B6K5 115 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 SCGB2A1O75556 95 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 THBDP07204 575 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 COX7A1P24310 79 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 CDSNQ15517 529 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 PVRIGQ6DKI7 326 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 ONECUT1Q9UBC0 465 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 C9JAW5 83 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 TMEM262E9PQX1 116 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 NDUFV3P56181 108 aaKnown RBP11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 OR11H6Q8NGC7 330 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 CFHR4Q92496 578 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 LINC01546A6NGU7 62 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 SPRY2O43597 315 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 CRLF1O75462 422 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
NCKIPSD-204ENST00000416649 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 TNFRSF13BO14836 293 aaPredicted RBP11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 ARL3P36405 182 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 PDE6HQ13956 83 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 SPANXN1Q5VSR9 72 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 CCL21O00585 134 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 TEX36Q5VZQ5 186 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 IL17RELQ6ZVW7 336 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 VCX2Q9H322 139 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 UTP20O75691 2785 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 CRYBG3Q68DQ2 2970 aa11.35□□□□□ -0.59
NCKIPSD-204ENST00000416649 IGHV1-8P0DP01 117 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 UBE2D1P51668 147 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 UBE2D3P61077 147 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 UBE2D2P62837 147 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 DYNAPQ8N1N2 210 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 C3orf56Q8N813 242 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 FAM208BQ5VWN6 2430 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 RNF182Q8N6D2 247 aa11.34□□□□□ -0.59
NCKIPSD-204ENST00000416649 NRACQ8N912 160 aa11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 VPS13CQ709C8 3753 aa11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 IGHV1-3A0A0C4DH29 117 aa11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 SLC25A20O43772 301 aa11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 LY6HO94772 140 aa11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-204ENST00000416649 J3KRW8 73 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms