RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ZNF492Q9P255 531 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MINOS1Q5TGZ0 78 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MINOS1-NBL1R4GNA1 71 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 TRBV7-1A0A0A6YYK4 115 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MBD3L4A6NDZ8 208 aaPredicted RBP10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MBD3L3A6NE82 208 aaPredicted RBP10.23□□□□□ -0.77
SCN1B-202ENST00000415950 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MBD3L5A6NJ08 208 aaPredicted RBP10.23□□□□□ -0.77
SCN1B-202ENST00000415950 FGF6P10767 208 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MBD3L2Q8NHZ7 208 aaPredicted RBP10.23□□□□□ -0.77
SCN1B-202ENST00000415950 ZNF462Q96JM2 2506 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
SCN1B-202ENST00000415950 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 CFHR3Q02985 330 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 PDE6HQ13956 83 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MAPK1IP1LQ8NDC0 245 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 VGLL1Q99990 258 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 IGLV3-9A0A075B6K5 115 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 PRSS46E5RG02 174 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 PRR30Q53SZ7 412 aaPredicted RBP10.22□□□□□ -0.77
SCN1B-202ENST00000415950 C9orf153Q5TBE3 101 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 TP53TG3Q9ULZ0 132 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 IGHV2-70DA0A0C4DH43 119 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 IGHG3P01860 377 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
SCN1B-202ENST00000415950 LEPROTO15243 131 aa10.21□□□□□ -0.77
SCN1B-202ENST00000415950 RNASE13Q5GAN3 156 aaKnown RBP10.21□□□□□ -0.77
SCN1B-202ENST00000415950 GTSF1Q8WW33 167 aa10.21□□□□□ -0.77
SCN1B-202ENST00000415950 A0A1W2PPM0 123 aa10.21□□□□□ -0.77
SCN1B-202ENST00000415950 K7EP34 96 aa10.21□□□□□ -0.77
SCN1B-202ENST00000415950 GAGE12HA6NDE8 117 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 OOSP1A8MZH6 123 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 CT83Q5H943 113 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 TEX36Q5VZQ5 186 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.78
SCN1B-202ENST00000415950 GHRHP01286 108 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 IGLC1P0CG04 106 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 AZU1P20160 251 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 LOXP28300 417 aaPredicted RBP10.21□□□□□ -0.78
SCN1B-202ENST00000415950 MSMPQ1L6U9 139 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 DTX2Q86UW9 622 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 DEFB125Q8N687 156 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 Q8N8P6 123 aa10.21□□□□□ -0.78
SCN1B-202ENST00000415950 COL4A4P53420 1690 aaPredicted RBP10.21□□□□□ -0.78
SCN1B-202ENST00000415950 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 ABCA12Q86UK0 2595 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 GAGE4Q13068 117 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 GAGE5Q13069 117 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 C22orf46C9J442 243 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 NXPH4O95158 308 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 HLA-DRB4P13762 266 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 PPDPFLQ8WWR9 84 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 FAM167A-AS1Q96KT0 104 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 PRO3102Q9H379 93 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 HLA-DRB4X5D2U9 266 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 WT1P19544 449 aaPredicted RBP10.2□□□□□ -0.78
SCN1B-202ENST00000415950 VPS13AQ96RL7 3174 aa10.2□□□□□ -0.78
SCN1B-202ENST00000415950 KLHL30-AS1Q8NEE0 82 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 H3BMM0 161 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 KRTAP27-1Q3LI81 207 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 LGALS9CQ6DKI2 356 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 ZNF503Q96F45 646 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
SCN1B-202ENST00000415950 TEX48A0A1B0GUV7 120 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 PMVKQ15126 192 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
SCN1B-202ENST00000415950 NDUFS7O75251 213 aa10.19□□□□□ -0.78
SCN1B-202ENST00000415950 TAX1BP3O14907 124 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 GDF5OSQ5U4N7 250 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 ZNF833PQ6ZTB9 187 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 C8orf86Q6ZUL3 223 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 M0R1W7 72 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 Q6ZS92 163 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 C1orf229Q6ZS94 237 aaPredicted RBP10.18□□□□□ -0.78
SCN1B-202ENST00000415950 ZFYVE26Q68DK2 2539 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 CDKN1BP46527 198 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 NDUFA12Q9UI09 145 aa10.18□□□□□ -0.78
SCN1B-202ENST00000415950 F8VRH5 84 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 CITED1Q99966 193 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 PRO1854Q9UHT4 67 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 TRBV20-1A0A075B6N2 111 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 TRAV12-1A0A0B4J245 112 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 B4DSR2 109 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
SCN1B-202ENST00000415950 SMIM2Q9BVW6 85 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 F6UB75 175 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 LOXL1Q08397 574 aaPredicted RBP10.17□□□□□ -0.78
SCN1B-202ENST00000415950 TRPT1Q86TN4 253 aaKnown RBP10.17□□□□□ -0.78
SCN1B-202ENST00000415950 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 CTSZQ9UBR2 303 aa10.17□□□□□ -0.78
SCN1B-202ENST00000415950 IGLV1-44P01699 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms