RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 OR4C5Q8NGB2 326 aa10.59□□□□□ -0.71
ACTB-202ENST00000414620 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
ACTB-202ENST00000414620 M0R2P5 195 aa10.58□□□□□ -0.72
ACTB-202ENST00000414620 STAG3L2P0CL84 134 aa10.58□□□□□ -0.72
ACTB-202ENST00000414620 STAG3L3P0CL85 134 aa10.58□□□□□ -0.72
ACTB-202ENST00000414620 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
ACTB-202ENST00000414620 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
ACTB-202ENST00000414620 GCHFRP30047 84 aa10.57□□□□□ -0.72
ACTB-202ENST00000414620 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
ACTB-202ENST00000414620 MED28Q9H204 178 aa10.57□□□□□ -0.72
ACTB-202ENST00000414620 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
ACTB-202ENST00000414620 LY96Q9Y6Y9 160 aa10.57□□□□□ -0.72
ACTB-202ENST00000414620 C9JCJ5 164 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 ORM1P02763 201 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 DNAH10OSP0CZ25 163 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
ACTB-202ENST00000414620 ERVFC1-1P60608 527 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 OR2G3Q8NGZ4 309 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 ASB13Q8WXK3 278 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 RAB24Q969Q5 203 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
ACTB-202ENST00000414620 DNAH5Q8TE73 4624 aa10.56□□□□□ -0.72
ACTB-202ENST00000414620 TCRAP04437 139 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 Q5BKY6 102 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 ARL6IP6Q8N6S5 226 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 AQP10Q96PS8 301 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 TXNDC17Q9BRA2 123 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 PSMG3Q9BT73 122 aaPredicted RBP10.55□□□□□ -0.72
ACTB-202ENST00000414620 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 PSG8Q9UQ74 426 aa10.55□□□□□ -0.72
ACTB-202ENST00000414620 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
ACTB-202ENST00000414620 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
ACTB-202ENST00000414620 EREGO14944 169 aa10.54□□□□□ -0.72
ACTB-202ENST00000414620 GCGP01275 180 aa10.54□□□□□ -0.72
ACTB-202ENST00000414620 PRNTQ86SH4 94 aa10.54□□□□□ -0.72
ACTB-202ENST00000414620 Q8N1X5 172 aa10.54□□□□□ -0.72
ACTB-202ENST00000414620 SERTM2A0A1B0GWG4 89 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 GGTLC3B5MD39 225 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 PTTG1O95997 202 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 EVI2AP22794 236 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 PPT1P50897 306 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
ACTB-202ENST00000414620 NFE4Q86UQ8 179 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 BATF3Q9NR55 127 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
ACTB-202ENST00000414620 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
ACTB-202ENST00000414620 K7EQM0 130 aa10.52□□□□□ -0.73
ACTB-202ENST00000414620 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
ACTB-202ENST00000414620 FLI1Q01543 452 aaPredicted RBP10.52□□□□□ -0.73
ACTB-202ENST00000414620 ZFP69Q49AA0 526 aa10.52□□□□□ -0.73
ACTB-202ENST00000414620 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
ACTB-202ENST00000414620 SUN5Q8TC36 379 aa10.52□□□□□ -0.73
ACTB-202ENST00000414620 ACTR3CQ9C0K3 210 aaPredicted RBP10.52□□□□□ -0.73
ACTB-202ENST00000414620 A0A087WTM6 91 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 FXYD6-FXYD2A0A087WZ82 144 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 CXorf1O96002 111 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 IGLV2-11P01706 119 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 MBP02144 154 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 CRYGDP07320 174 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 SERF2P84101 59 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 SMUG1Q53HV7 270 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 RPL7L1Q6DKI1 246 aaKnown RBP10.51□□□□□ -0.73
ACTB-202ENST00000414620 CYB561D1Q8N8Q1 229 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 TMEM167BQ9NRX6 74 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
ACTB-202ENST00000414620 TRAV34A0A0B4J273 112 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 RNF222A6NCQ9 220 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 PGPEP1LA6NFU8 196 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 TAAR5O14804 337 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 RS1O15537 224 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 PFN1P07737 140 aaKnown RBP10.5□□□□□ -0.73
ACTB-202ENST00000414620 GIPP09681 153 aaPredicted RBP10.5□□□□□ -0.73
ACTB-202ENST00000414620 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 TNFSF18Q9UNG2 199 aa10.5□□□□□ -0.73
ACTB-202ENST00000414620 UBE2G2P60604 165 aa10.49□□□□□ -0.73
ACTB-202ENST00000414620 ZNF726P1Q15940 193 aa10.49□□□□□ -0.73
ACTB-202ENST00000414620 ZNF506Q5JVG8 444 aa10.49□□□□□ -0.73
ACTB-202ENST00000414620 INO80EQ8NBZ0 244 aaPredicted RBP10.49□□□□□ -0.73
ACTB-202ENST00000414620 LINC00479Q96M42 142 aa10.49□□□□□ -0.73
ACTB-202ENST00000414620 IGHV3-38A0A0C4DH36 116 aa10.48□□□□□ -0.73
ACTB-202ENST00000414620 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
ACTB-202ENST00000414620 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
ACTB-202ENST00000414620 RHOHQ15669 191 aa10.48□□□□□ -0.73
ACTB-202ENST00000414620 OR10J3Q5JRS4 329 aa10.48□□□□□ -0.73
ACTB-202ENST00000414620 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
ACTB-202ENST00000414620 SH2D6Q7Z4S9 175 aa10.48□□□□□ -0.73
ACTB-202ENST00000414620 PRADC1Q9BSG0 188 aa10.48□□□□□ -0.73
ACTB-202ENST00000414620 BORCS7-ASMTA0A0B4J1R7 106 aa10.47□□□□□ -0.73
ACTB-202ENST00000414620 IFNA7P01567 189 aa10.47□□□□□ -0.73
ACTB-202ENST00000414620 IGHV3-30P01768 117 aa10.47□□□□□ -0.73
ACTB-202ENST00000414620 IGHV3-33P01772 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms