RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 URGCP-MRPS24S4R325 110 aa12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 FABP5P3A8MUU1 101 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 A8MWL6 223 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 CRISP2P16562 243 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 TSKUQ8WUA8 353 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 PYGO2Q9BRQ0 406 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 GFRA4Q9GZZ7 299 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 CSTL1Q9H114 145 aa12.38□□□□□ -0.43
SCAMP4-204ENST00000414057 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
SCAMP4-204ENST00000414057 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
SCAMP4-204ENST00000414057 NUPR2A6NF83 97 aa12.37□□□□□ -0.43
SCAMP4-204ENST00000414057 F6UB75 175 aa12.37□□□□□ -0.43
SCAMP4-204ENST00000414057 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
SCAMP4-204ENST00000414057 SH2D1AO60880 128 aa12.36□□□□□ -0.43
SCAMP4-204ENST00000414057 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-204ENST00000414057 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-204ENST00000414057 CRIP1P50238 77 aa12.36□□□□□ -0.43
SCAMP4-204ENST00000414057 DEFB131AP59861 70 aa12.36□□□□□ -0.43
SCAMP4-204ENST00000414057 A0A1W2PPQ1 181 aa12.35□□□□□ -0.43
SCAMP4-204ENST00000414057 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
SCAMP4-204ENST00000414057 LEPP41159 167 aa12.35□□□□□ -0.43
SCAMP4-204ENST00000414057 RPS20P60866 119 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-204ENST00000414057 NAT8BQ9UHF3 227 aa12.35□□□□□ -0.43
SCAMP4-204ENST00000414057 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
SCAMP4-204ENST00000414057 A8MTW9 85 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 RAB5AP20339 215 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 TSPOP30536 169 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 Q6AWC8 147 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 ZFAND2AQ8N6M9 145 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 OR2D3Q8NGH3 330 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 CLUHP3Q96NS8 147 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 DNAH1Q9P2D7 4330 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 TGIF2-C20orf24A0A0A6YYL0 155 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 KLLNB2CW77 178 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 TYMSP04818 313 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 GPX1P07203 203 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 ZNF80P51504 273 aaPredicted RBP12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 FAM3BP58499 235 aaPredicted RBP12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 DEFB1P60022 68 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 ZNF124Q15973 351 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
SCAMP4-204ENST00000414057 TRAV21A0A0B4J279 112 aa12.33□□□□□ -0.44
SCAMP4-204ENST00000414057 CXCL1P09341 107 aa12.33□□□□□ -0.44
SCAMP4-204ENST00000414057 FOXA3P55318 350 aaPredicted RBP12.33□□□□□ -0.44
SCAMP4-204ENST00000414057 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
SCAMP4-204ENST00000414057 H3BMM0 161 aa12.32□□□□□ -0.44
SCAMP4-204ENST00000414057 CA1P00915 261 aaPredicted RBP12.32□□□□□ -0.44
SCAMP4-204ENST00000414057 COX19Q49B96 90 aa12.32□□□□□ -0.44
SCAMP4-204ENST00000414057 STHQ8IWL8 128 aa12.32□□□□□ -0.44
SCAMP4-204ENST00000414057 NEU1Q99519 415 aa12.32□□□□□ -0.44
SCAMP4-204ENST00000414057 CDKN1BP46527 198 aa12.31□□□□□ -0.44
SCAMP4-204ENST00000414057 ACTL10Q5JWF8 245 aa12.31□□□□□ -0.44
SCAMP4-204ENST00000414057 CEMP1Q6PRD7 247 aaPredicted RBP12.31□□□□□ -0.44
SCAMP4-204ENST00000414057 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
SCAMP4-204ENST00000414057 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
SCAMP4-204ENST00000414057 ATP5L2Q7Z4Y8 100 aa12.3□□□□□ -0.44
SCAMP4-204ENST00000414057 ORM1P02763 201 aa12.29□□□□□ -0.44
SCAMP4-204ENST00000414057 TCL1AP56279 114 aa12.29□□□□□ -0.44
SCAMP4-204ENST00000414057 AMTNQ6UX39 209 aa12.29□□□□□ -0.44
SCAMP4-204ENST00000414057 NUP35Q8NFH5 326 aa12.29□□□□□ -0.44
SCAMP4-204ENST00000414057 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
SCAMP4-204ENST00000414057 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
SCAMP4-204ENST00000414057 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-204ENST00000414057 RPS10P46783 165 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-204ENST00000414057 PRR9Q5T870 116 aa12.28□□□□□ -0.44
SCAMP4-204ENST00000414057 GTSF1Q8WW33 167 aa12.28□□□□□ -0.44
SCAMP4-204ENST00000414057 LINC00476Q8WZB0 136 aa12.28□□□□□ -0.44
SCAMP4-204ENST00000414057 C7orf71A4D174 169 aa12.27□□□□□ -0.44
SCAMP4-204ENST00000414057 AMBPP02760 352 aa12.27□□□□□ -0.44
SCAMP4-204ENST00000414057 WDR73Q6P4I2 378 aa12.27□□□□□ -0.44
SCAMP4-204ENST00000414057 MORN3Q6PF18 240 aaPredicted RBP12.27□□□□□ -0.44
SCAMP4-204ENST00000414057 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.44
SCAMP4-204ENST00000414057 A0A1B0GW15 77 aa12.27□□□□□ -0.45
SCAMP4-204ENST00000414057 C11orf45Q8TAV5 145 aa12.27□□□□□ -0.45
SCAMP4-204ENST00000414057 BORCS7Q96B45 105 aa12.27□□□□□ -0.45
SCAMP4-204ENST00000414057 KCNS1Q96KK3 526 aa12.27□□□□□ -0.45
SCAMP4-204ENST00000414057 C1orf196B1AJZ1 125 aa12.26□□□□□ -0.45
SCAMP4-204ENST00000414057 LY6G6CO95867 125 aa12.26□□□□□ -0.45
SCAMP4-204ENST00000414057 IGKV3-20P01619 116 aa12.26□□□□□ -0.45
SCAMP4-204ENST00000414057 MT-ND6P03923 174 aa12.26□□□□□ -0.45
SCAMP4-204ENST00000414057 NUTF2P61970 127 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-204ENST00000414057 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-204ENST00000414057 IGKV3D-20A0A0C4DH25 116 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 F2Z2F3 143 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 J3KRW8 73 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 S100A8P05109 93 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 GFI1BQ5VTD9 330 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 TRPT1Q86TN4 253 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
SCAMP4-204ENST00000414057 TMSB15BA0A087X1C1 80 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 A0A1B0GUT8 65 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 M0R2Z0 102 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms