RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 BCL2L11O43521 198 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 GCGP01275 180 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 TYMSP04818 313 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 SEC11BP0C7V7 166 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 Q6ZR54 194 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 SPXQ9BT56 116 aa10.3□□□□□ -0.76
LIMS4-201ENST00000413601 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
LIMS4-201ENST00000413601 TMUB2Q71RG4 321 aa10.29□□□□□ -0.76
LIMS4-201ENST00000413601 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
LIMS4-201ENST00000413601 NKX6-2Q9C056 277 aaPredicted RBP10.29□□□□□ -0.76
LIMS4-201ENST00000413601 SDF2L1Q9HCN8 221 aa10.29□□□□□ -0.76
LIMS4-201ENST00000413601 C11orf21Q9P2W6 132 aa10.29□□□□□ -0.76
LIMS4-201ENST00000413601 FBLL1A6NHQ2 334 aaKnown RBP10.28□□□□□ -0.76
LIMS4-201ENST00000413601 PEX7O00628 323 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 PFDN1O60925 122 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 FHL2Q14192 279 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 ZFP69Q49AA0 526 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 SMUG1Q53HV7 270 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 ZNRF2Q8NHG8 242 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 STOML3Q8TAV4 291 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 FAM213BQ8TBF2 198 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 RASL10AQ92737 203 aa10.28□□□□□ -0.76
LIMS4-201ENST00000413601 BIRC6Q9NR09 4857 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 A0A096LPF7 62 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 UMAD1C9J7I0 102 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 RTL8CO15255 209 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 PAX4O43316 350 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 PFN1P07737 140 aaKnown RBP10.27□□□□□ -0.77
LIMS4-201ENST00000413601 SFTA3P0C7M3 94 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 ESRGQ1W209 222 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 SFT2D1Q8WV19 159 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 ARL2-SNX15V9GYD0 113 aa10.27□□□□□ -0.77
LIMS4-201ENST00000413601 TRGV4A0A0C4DH28 118 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 A0A1B0GV50 99 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 M0R2P5 195 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 PPT1P50897 306 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 CST9LP1Q5W188 147 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 Q6ZNX1 250 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 LINC00336Q6ZUF6 198 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 MBD3L1Q8WWY6 194 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 HHLA3Q9XRX5 114 aa10.26□□□□□ -0.77
LIMS4-201ENST00000413601 PAGE4O60829 102 aa10.25□□□□□ -0.77
LIMS4-201ENST00000413601 CRYBA4P53673 196 aa10.25□□□□□ -0.77
LIMS4-201ENST00000413601 EIF5AP63241 154 aaKnown RBP10.25□□□□□ -0.77
LIMS4-201ENST00000413601 Q86TA4 180 aa10.25□□□□□ -0.77
LIMS4-201ENST00000413601 DNAH10Q8IVF4 4471 aa10.25□□□□□ -0.77
LIMS4-201ENST00000413601 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
LIMS4-201ENST00000413601 TPT1P13693 172 aaKnown RBP10.24□□□□□ -0.77
LIMS4-201ENST00000413601 SLAQ13239 276 aa10.24□□□□□ -0.77
LIMS4-201ENST00000413601 LGALSLQ3ZCW2 172 aaPredicted RBP10.24□□□□□ -0.77
LIMS4-201ENST00000413601 DPPA3Q6W0C5 159 aa10.24□□□□□ -0.77
LIMS4-201ENST00000413601 TCTE3Q8IZS6 198 aa10.24□□□□□ -0.77
LIMS4-201ENST00000413601 Q9H8V8 135 aa10.24□□□□□ -0.77
LIMS4-201ENST00000413601 ICOSQ9Y6W8 199 aa10.24□□□□□ -0.77
LIMS4-201ENST00000413601 TRAV4A0A0B4J268 109 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 PRSS29PA6NIE9 313 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 C9JCJ5 164 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 H2AFB1P0C5Y9 115 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 OR4C5Q8NGB2 326 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 FMC1Q96HJ9 113 aa10.23□□□□□ -0.77
LIMS4-201ENST00000413601 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
LIMS4-201ENST00000413601 FABP5P3A8MUU1 101 aa10.22□□□□□ -0.77
LIMS4-201ENST00000413601 UBE2G1P62253 170 aa10.22□□□□□ -0.77
LIMS4-201ENST00000413601 ZC2HC1AQ96GY0 325 aa10.22□□□□□ -0.77
LIMS4-201ENST00000413601 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
LIMS4-201ENST00000413601 UPK3BQ9BT76 320 aa10.22□□□□□ -0.77
LIMS4-201ENST00000413601 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 C1QBP02746 253 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 RNASE3P12724 160 aaKnown RBP10.21□□□□□ -0.77
LIMS4-201ENST00000413601 CRIP1P50238 77 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
LIMS4-201ENST00000413601 ZNF876PQ49A33 203 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 SOHLH1Q5JUK2 328 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 TCEAL7Q9BRU2 100 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 ZFP30Q9Y2G7 519 aa10.21□□□□□ -0.77
LIMS4-201ENST00000413601 A0A1B0GVY2 172 aa10.2□□□□□ -0.78
LIMS4-201ENST00000413601 PGPEP1LA6NFU8 196 aa10.2□□□□□ -0.78
LIMS4-201ENST00000413601 ORM1P02763 201 aa10.2□□□□□ -0.78
LIMS4-201ENST00000413601 AKR1C3P42330 323 aa10.2□□□□□ -0.78
LIMS4-201ENST00000413601 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 SCO2A0A1W2PP80 73 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 K7EQD1 137 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 LTAP01374 205 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 GYPEP15421 78 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 COX8CQ7Z4L0 72 aa10.19□□□□□ -0.78
LIMS4-201ENST00000413601 B4DEV8 164 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 M0R036 132 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 RS1O15537 224 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 SH2D1AO60880 128 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
LIMS4-201ENST00000413601 CCL20P78556 96 aa10.18□□□□□ -0.78
LIMS4-201ENST00000413601 FAM162BQ5T6X4 162 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms