RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 Q9HAA7 133 aa8.05□□□□□ -1.12
LIMS2-210ENST00000413578 NUDT15Q9NV35 164 aa8.05□□□□□ -1.12
LIMS2-210ENST00000413578 BOLA1Q9Y3E2 137 aa8.05□□□□□ -1.12
LIMS2-210ENST00000413578 TRAV6A0A075B6T7 132 aa8.04□□□□□ -1.12
LIMS2-210ENST00000413578 TRAV8-6A0A0B4J262 113 aa8.04□□□□□ -1.12
LIMS2-210ENST00000413578 TYMSP04818 313 aa8.04□□□□□ -1.12
LIMS2-210ENST00000413578 PFN1P07737 140 aaKnown RBP8.04□□□□□ -1.12
LIMS2-210ENST00000413578 LELP1Q5T871 98 aa8.04□□□□□ -1.12
LIMS2-210ENST00000413578 SLC25A29Q8N8R3 303 aa8.04□□□□□ -1.12
LIMS2-210ENST00000413578 TVP23CQ96ET8 276 aa8.04□□□□□ -1.12
LIMS2-210ENST00000413578 WDR61Q9GZS3 305 aaKnown RBP8.04□□□□□ -1.12
LIMS2-210ENST00000413578 TRBV6-4A0A1B0GX49 114 aa8.03□□□□□ -1.12
LIMS2-210ENST00000413578 OR7C2O60412 319 aa8.03□□□□□ -1.12
LIMS2-210ENST00000413578 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
LIMS2-210ENST00000413578 DPPA3Q6W0C5 159 aa8.03□□□□□ -1.12
LIMS2-210ENST00000413578 NAGKQ9UJ70 344 aa8.03□□□□□ -1.12
LIMS2-210ENST00000413578 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
LIMS2-210ENST00000413578 TRAV21A0A0B4J279 112 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 FBLL1A6NHQ2 334 aaKnown RBP8.02□□□□□ -1.13
LIMS2-210ENST00000413578 RS1O15537 224 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 IGHV3-30P01768 117 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 IGHV3-33P01772 117 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 IGHV3-30-3P0DP02 117 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 IGHV3-30-5P0DP03 117 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 UBE2L3P68036 154 aaKnown RBP8.02□□□□□ -1.13
LIMS2-210ENST00000413578 RHOHQ15669 191 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 OR10J3Q5JRS4 329 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 CFAP126Q5VTH2 177 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 Q8N3U1 123 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 TM2D2Q9BX73 214 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 GTSF1LQ9H1H1 148 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 KCNIP2Q9NS61 270 aa8.02□□□□□ -1.13
LIMS2-210ENST00000413578 H0YIZ8 118 aa8.01□□□□□ -1.13
LIMS2-210ENST00000413578 CIDEAO60543 219 aa8.01□□□□□ -1.13
LIMS2-210ENST00000413578 LINC00694P0DN24 101 aa8.01□□□□□ -1.13
LIMS2-210ENST00000413578 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
LIMS2-210ENST00000413578 ARL6IP6Q8N6S5 226 aa8.01□□□□□ -1.13
LIMS2-210ENST00000413578 SDF2L1Q9HCN8 221 aa8.01□□□□□ -1.13
LIMS2-210ENST00000413578 F6UZH7 168 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 H2AFB2P0C5Z0 115 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 KCNS1Q96KK3 526 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 PRADC1Q9BSG0 188 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 OTORQ9NRC9 128 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 OR5AC2Q9NZP5 309 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 C11orf21Q9P2W6 132 aa8□□□□□ -1.13
LIMS2-210ENST00000413578 TRAV8-1A0A0A6YYK1 113 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 C17orf112F2Z3M2 114 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 KHDC3LQ587J8 217 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 GOLT1AQ6ZVE7 132 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 ATP6V0E2Q8NHE4 81 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 ASB13Q8WXK3 278 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 PTH2Q96A98 100 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 HYLS1Q96M11 299 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 C9orf85Q96MD7 179 aa7.99□□□□□ -1.13
LIMS2-210ENST00000413578 TRAV8-3A0A0A6YYJ7 113 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 IGHV3-73A0A0B4J1V6 119 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 PGPA6NDG6 321 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 LECT2O14960 151 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
LIMS2-210ENST00000413578 OXTP01178 125 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 FFAR4Q5NUL3 377 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 ATP5SQ99766 215 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 TREM1Q9NP99 234 aa7.98□□□□□ -1.13
LIMS2-210ENST00000413578 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.97□□□□□ -1.13
LIMS2-210ENST00000413578 SIX6O95475 246 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 MGST1P10620 155 aaKnown RBP7.97□□□□□ -1.13
LIMS2-210ENST00000413578 ZNF80P51504 273 aaPredicted RBP7.97□□□□□ -1.13
LIMS2-210ENST00000413578 TAS2R45P59539 299 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 ASAH1Q13510 395 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 ZNF506Q5JVG8 444 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 DAZ4Q86SG3 579 aaKnown RBP7.97□□□□□ -1.13
LIMS2-210ENST00000413578 SYT8Q8NBV8 401 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 CMTM2Q8TAZ6 248 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 CHAC1Q9BUX1 264 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 NMES1Q9C002 83 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 DAZ3Q9NR90 486 aaKnown RBP7.97□□□□□ -1.13
LIMS2-210ENST00000413578 MBD2Q9UBB5 411 aa7.97□□□□□ -1.13
LIMS2-210ENST00000413578 PGPEP1LA6NFU8 196 aa7.96□□□□□ -1.14
LIMS2-210ENST00000413578 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
LIMS2-210ENST00000413578 GNG5P63218 68 aa7.96□□□□□ -1.14
LIMS2-210ENST00000413578 FAM74A1Q5RGS3 127 aa7.96□□□□□ -1.14
LIMS2-210ENST00000413578 BAALCQ8WXS3 180 aa7.96□□□□□ -1.14
LIMS2-210ENST00000413578 RPH3ALQ9UNE2 315 aa7.96□□□□□ -1.14
LIMS2-210ENST00000413578 RNF222A6NCQ9 220 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 LRRC37A5PQ49AS3 106 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 TOR2AQ5JU69 321 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 UFSP1Q6NVU6 142 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 PQLC2Q6ZP29 291 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 CIRBP-AS1Q8TBR5 109 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 CCDC32Q9BV29 185 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 Q9UF83 564 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 COX11Q9Y6N1 276 aa7.95□□□□□ -1.14
LIMS2-210ENST00000413578 FAM240BA0A1B0GVZ2 78 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 IGLV2-11P01706 119 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 ZFP2Q6ZN57 461 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 TMEM75Q8N9X5 138 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 DNAJC30Q96LL9 226 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 SGK494Q96LW2 274 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms