RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 ETDBQ3ZM63 59 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 LINC00477Q96M19 166 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 DPH3P1Q9H4G8 78 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 ADGRG4Q8IZF6 3080 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 LGALS1P09382 135 aaKnown RBP13.43□□□□□ -0.26
SDCBP-202ENST00000413219 PRR9Q5T870 116 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 AJUBAQ96IF1 538 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 C16orf92Q96LL3 132 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 RAXQ9Y2V3 346 aa13.43□□□□□ -0.26
SDCBP-202ENST00000413219 HOXA3O43365 443 aaPredicted RBP13.42□□□□□ -0.26
SDCBP-202ENST00000413219 Q6ZQT7 251 aa13.42□□□□□ -0.26
SDCBP-202ENST00000413219 TRAV21A0A0B4J279 112 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 TMEM238LA0A1B0GVL6 79 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 A6NJY4 79 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
SDCBP-202ENST00000413219 SH2D6Q7Z4S9 175 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 ANKRD11Q6UB99 2663 aaPredicted RBP13.41□□□□□ -0.26
SDCBP-202ENST00000413219 IGHV3-49A0A0A0MS15 119 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 G3V318 75 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 PPP1R17O96001 155 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 AMTNQ6UX39 209 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 BAALCQ8WXS3 180 aa13.41□□□□□ -0.26
SDCBP-202ENST00000413219 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
SDCBP-202ENST00000413219 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
SDCBP-202ENST00000413219 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
SDCBP-202ENST00000413219 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
SDCBP-202ENST00000413219 ASIPP42127 132 aa13.4□□□□□ -0.27
SDCBP-202ENST00000413219 ATP6V0E2Q8NHE4 81 aa13.4□□□□□ -0.27
SDCBP-202ENST00000413219 PRADC1Q9BSG0 188 aa13.4□□□□□ -0.27
SDCBP-202ENST00000413219 CYSLTR1Q9Y271 337 aa13.4□□□□□ -0.27
SDCBP-202ENST00000413219 OVOL1O14753 267 aa13.39□□□□□ -0.27
SDCBP-202ENST00000413219 SPOCK3Q9BQ16 436 aa13.39□□□□□ -0.27
SDCBP-202ENST00000413219 KLK15Q9H2R5 256 aa13.39□□□□□ -0.27
SDCBP-202ENST00000413219 ACACAQ13085 2346 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 PRSS29PA6NIE9 313 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 LINC01549A6NIU2 74 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 RNF223E7ERA6 249 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 FAM223BA6NKX1 122 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 NDUFS8O00217 210 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 S100A4P26447 101 aaKnown RBP13.38□□□□□ -0.27
SDCBP-202ENST00000413219 SCGB2A2Q13296 93 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 FAM223AQ8IWN6 122 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 OR10J6PQ8NGY7 276 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 PGPEP1Q9NXJ5 209 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 PHLDA3Q9Y5J5 127 aa13.38□□□□□ -0.27
SDCBP-202ENST00000413219 LINC01548A6NM66 108 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 K7ENP7 123 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 CCL21O00585 134 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 COX6B1P14854 86 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 SAA4P35542 130 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 UBE2D1P51668 147 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 RPL32P62910 135 aaKnown RBP13.37□□□□□ -0.27
SDCBP-202ENST00000413219 POM121L12Q8N7R1 296 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 RPL39LQ96EH5 51 aaKnown RBP13.37□□□□□ -0.27
SDCBP-202ENST00000413219 AGRNO00468 2067 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 BSNQ9UPA5 3926 aa13.37□□□□□ -0.27
SDCBP-202ENST00000413219 IGHV1-69DA0A0B4J2H0 117 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 C14orf178Q8N769 122 aaPredicted RBP13.36□□□□□ -0.27
SDCBP-202ENST00000413219 DLX4Q92988 240 aaPredicted RBP13.36□□□□□ -0.27
SDCBP-202ENST00000413219 ANKHD1Q8IWZ3 2542 aaKnown RBP13.36□□□□□ -0.27
SDCBP-202ENST00000413219 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 A0A1B0GV72 72 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 IGF1P05019 195 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 C5orf56Q8N8D9 126 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 PIEZO2Q9H5I5 2752 aa13.36□□□□□ -0.27
SDCBP-202ENST00000413219 TRBV7-9A0A0J9YWB2 115 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 CFAP126Q5VTH2 177 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 APRG1Q8IVJ8 170 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 FAM19A4Q96LR4 140 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 MRPL16Q9NX20 251 aaKnown RBP13.35□□□□□ -0.27
SDCBP-202ENST00000413219 DMXL1Q9Y485 3027 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 SOCS3O14543 225 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 CRIP2P52943 208 aaPredicted RBP13.35□□□□□ -0.27
SDCBP-202ENST00000413219 ANXA2RQ3ZCQ2 193 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 C1QTNF4Q9BXJ3 329 aa13.35□□□□□ -0.27
SDCBP-202ENST00000413219 NXPH4O95158 308 aa13.34□□□□□ -0.27
SDCBP-202ENST00000413219 APOMO95445 188 aa13.34□□□□□ -0.27
SDCBP-202ENST00000413219 LYRM7Q5U5X0 104 aa13.34□□□□□ -0.27
SDCBP-202ENST00000413219 SCGB1D4Q6XE38 83 aa13.34□□□□□ -0.27
SDCBP-202ENST00000413219 GPHB5Q86YW7 130 aa13.34□□□□□ -0.27
SDCBP-202ENST00000413219 MGPP08493 103 aa13.33□□□□□ -0.27
SDCBP-202ENST00000413219 TACC2O95359 2948 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 TRAV41A0A0B4J266 112 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 HERVK_113P61574 105 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 ADORA2A-AS1P86434 159 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 FOXI1Q12951 378 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 CDSNQ15517 529 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 MTURNQ8N3F0 131 aa13.33□□□□□ -0.28
SDCBP-202ENST00000413219 IGHV4OR15-8A0A075B7B6 117 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 A0A087WW49 117 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 NDUFA4O00483 81 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 ARL3P36405 182 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 INSL3P51460 131 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 UBE2D3P61077 147 aa13.32□□□□□ -0.28
SDCBP-202ENST00000413219 UBE2D2P62837 147 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms