RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CSPG4Q6UVK1 2322 aa6.75□□□□□ -1.33
PBRM1-209ENST00000412587 IGLV3-9A0A075B6K5 115 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PRR20EP86478 221 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PRR20CP86479 221 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PRR20DP86480 221 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PRR20BP86481 221 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PRR20AP86496 221 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 Q71RC1 249 aaPredicted RBP6.74□□□□□ -1.33
PBRM1-209ENST00000412587 EXOC3-AS1Q8N2X6 119 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 LINC01587Q99440 93 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PLCE1Q9P212 2302 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.74□□□□□ -1.33
PBRM1-209ENST00000412587 TCL1BO95988 128 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 LYPD1Q8N2G4 141 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 KIF26AQ9ULI4 1882 aaPredicted RBP6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PLXND1Q9Y4D7 1925 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 PTPN13Q12923 2485 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 C2orf16Q68DN1 1984 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 DKK1O94907 266 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
PBRM1-209ENST00000412587 IL17RELQ6ZVW7 336 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 C8orf31Q8N9H6 132 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 NSUN5P1Q3KNT7 163 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 WDR86Q86TI4 376 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 RNF138Q8WVD3 245 aa6.74□□□□□ -1.33
PBRM1-209ENST00000412587 IGKV1-16P04430 117 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 ASPHD1Q5U4P2 390 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 LTBP2Q14767 1821 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 STHQ8IWL8 128 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 TMEM75Q8N9X5 138 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 PIFOQ8TCI5 191 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 UBE2E1P51965 193 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 MAPK1IP1LQ8NDC0 245 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 A0A1W2PNU3 283 aaPredicted RBP6.73□□□□□ -1.33
PBRM1-209ENST00000412587 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
PBRM1-209ENST00000412587 SOCS3O14543 225 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 SRD5A1P18405 259 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 SEC61GP60059 68 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 MED13Q9UHV7 2174 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 LOXP28300 417 aaPredicted RBP6.72□□□□□ -1.33
PBRM1-209ENST00000412587 MRPL55Q7Z7F7 128 aaKnown RBP6.72□□□□□ -1.33
PBRM1-209ENST00000412587 SPRY4Q9C004 299 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 PMS2P5A8MQ11 134 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 TRGV2A0A075B6R0 118 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 FAM120AOSQ5T036 256 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 SIGLEC15Q6ZMC9 328 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 ZNF493Q6ZR52 646 aa6.72□□□□□ -1.33
PBRM1-209ENST00000412587 ARFGEF3Q5TH69 2177 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 IGKV3OR2-268A0A0C4DH90 116 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 A0A0U1RQV1 116 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 RUSC1-AS1Q66K80 236 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 PIP4P2Q8N4L2 257 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 USMG5Q96IX5 58 aa6.71□□□□□ -1.33
PBRM1-209ENST00000412587 TRBV7-1A0A0A6YYK4 115 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 hADV29S1A0JD25 119 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 COX7CP15954 63 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
PBRM1-209ENST00000412587 TEX36Q5VZQ5 186 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 IGHV1-69DA0A0B4J2H0 117 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 OVOL1O14753 267 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 IGHV1-69P01742 117 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 NDUFA11Q86Y39 141 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 Q96MF0 132 aa6.71□□□□□ -1.34
PBRM1-209ENST00000412587 SONP18583 2426 aaKnown RBP6.71□□□□□ -1.34
PBRM1-209ENST00000412587 RNASE2P10153 161 aaKnown RBP6.7□□□□□ -1.34
PBRM1-209ENST00000412587 HTN3P15516 51 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 GRNP28799 593 aaKnown RBP6.7□□□□□ -1.34
PBRM1-209ENST00000412587 GDF5OSQ5U4N7 250 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 CNTFRP26992 372 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 DKK4Q9UBT3 224 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 J3QQQ9 107 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 IGLV3-1P01715 115 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 ZFP2Q6ZN57 461 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 ZNF503Q96F45 646 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 LAMTOR3Q9UHA4 124 aa6.7□□□□□ -1.34
PBRM1-209ENST00000412587 TINCRA0A1B0GVN0 87 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 FXYD5Q96DB9 178 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 IGHG2P01859 326 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 C17orf58Q2M2W7 97 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
PBRM1-209ENST00000412587 KLHL30-AS1Q8NEE0 82 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 IGF2RP11717 2491 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 TEX49A0A1B0GTD5 131 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 CMC4P56277 68 aaPredicted RBP6.69□□□□□ -1.34
PBRM1-209ENST00000412587 MLANAQ16655 118 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 TIMM21Q9BVV7 248 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 DPH3P1Q9H4G8 78 aa6.69□□□□□ -1.34
PBRM1-209ENST00000412587 FAM223BA6NKX1 122 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms