RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 VPS25Q9BRG1 176 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 EBPLQ9BY08 206 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 MROQ9BYG7 248 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 RSPH9Q9H1X1 276 aaPredicted RBP-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 SYNCQ9H7C4 482 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 C19orf12Q9NSK7 152 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 TCEAL9Q9UHQ7 104 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 SNX6Q9UNH7 406 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 HDGFL3Q9Y3E1 203 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM2Q9UHN6 1383 aa-2.75□□□□□ -2.85
RNU4-88P-201ENST00000411220 GOLGA8TH3BQL2 631 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 PGRMC1O00264 195 aaKnown RBP-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 GOSR2O14653 212 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 FAM107AO95990 144 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 CLTBP09497 229 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 MCF2P10911 925 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 NQO2P16083 231 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 MED22Q15528 200 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM128Q5BJH2 165 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 TAF7LQ5H9L4 462 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 TANGO2Q6ICL3 276 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM107Q6UX40 140 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 IQCF2Q8IXL9 164 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 OR8H2Q8N162 312 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 DTD1Q8TEA8 209 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 CHCHD1Q96BP2 118 aaKnown RBP-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 SAT2Q96F10 170 aaPredicted RBP-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 C8orf76Q96K31 380 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 FAM167A-AS1Q96KT0 104 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM237Q96Q45 408 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 CIB3Q96Q77 187 aaPredicted RBP-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 PANX1Q96RD7 426 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 DHRS9Q9BPW9 319 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM109Q9BVC6 243 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 ENY2Q9NPA8 101 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 OSTCQ9NRP0 149 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 DMAC2Q9NW81 257 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 BCAP29Q9UHQ4 241 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 R4GMQ9 66 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 RIMS1Q86UR5 1692 aaKnown RBP-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 NUP188Q5SRE5 1749 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 FGD6Q6ZV73 1430 aa-2.76□□□□□ -2.85
RNU4-88P-201ENST00000411220 NUP210LQ5VU65 1888 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 RNF17Q9BXT8 1623 aaKnown RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 TRAV5A0A0B4J249 113 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 TRAV34A0A0B4J273 112 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 C3orf85A0A1B0GTC6 90 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 EDDM13A0A1B0GTR0 161 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 A0A1B0GU69 56 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 OR2AG2A6NM03 316 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 M0R3G1 203 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 PSMD11O00231 422 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 APOC3P02656 99 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 IFNA16P05015 189 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 CRHP06850 196 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 UBL4AP11441 157 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 HMGB2P26583 209 aaKnown RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 POLR2JP52435 117 aaKnown RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 RHOBP62745 196 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 TFAMQ00059 246 aaKnown RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 CUL4AQ13619 759 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 MFSD4BQ5TF39 518 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 TMEM154Q6P9G4 183 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 VTCN1Q7Z7D3 282 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 PDZD9Q8IXQ8 264 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 SVIPQ8NHG7 77 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 PIGXQ8TBF5 258 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 FAM81AQ8TBF8 368 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 STAG3L4Q8TBR4 150 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 LGALS14Q8TCE9 139 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 UBLCP1Q8WVY7 318 aaPredicted RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 DCUN1D1Q96GG9 259 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 JAKMIP1Q96N16 626 aaKnown RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 PRADC1Q9BSG0 188 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 MAP1LC3CQ9BXW4 147 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 NACA2Q9H009 215 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 RGCCQ9H4X1 137 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 MID1IP1Q9NPA3 183 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 CCDC59Q9P031 241 aaKnown RBP-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 EMC3Q9P0I2 261 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 VPS29Q9UBQ0 182 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 RICTORQ6R327 1708 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 ANKRD26Q9UPS8 1709 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 KIAA0232Q92628 1395 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 VPS8Q8N3P4 1428 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 SCAPERQ9BY12 1400 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 PLEKHH2Q8IVE3 1493 aa-2.77□□□□□ -2.85
RNU4-88P-201ENST00000411220 FAM135AQ9P2D6 1515 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 PREX2Q70Z35 1606 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CHD1O14646 1710 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 MON2Q7Z3U7 1717 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 NRAPQ86VF7 1730 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 LOC100130705A0A1B0GUX0 176 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CLPSL1A2RUU4 121 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 UQCR11O14957 56 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 IFNA21P01568 189 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 CXCL10P02778 98 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 RAB5AP20339 215 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 GADD45AP24522 165 aa-2.78□□□□□ -2.85
RNU4-88P-201ENST00000411220 PSMA2P25787 234 aa-2.78□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms