RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 OR4X2Q8NGF9 303 aa10.74□□□□□ -0.69
CNGA3-204ENST00000409937 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
CNGA3-204ENST00000409937 CACNA1AO00555 2505 aa10.74□□□□□ -0.69
CNGA3-204ENST00000409937 LMO4P61968 165 aa10.73□□□□□ -0.69
CNGA3-204ENST00000409937 WFDC12Q8WWY7 111 aa10.73□□□□□ -0.69
CNGA3-204ENST00000409937 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.69
CNGA3-204ENST00000409937 TRBV25-1A0A075B6N4 114 aa10.73□□□□□ -0.69
CNGA3-204ENST00000409937 RPL39LQ96EH5 51 aaKnown RBP10.73□□□□□ -0.69
CNGA3-204ENST00000409937 ZMAT4Q9H898 229 aa10.73□□□□□ -0.69
CNGA3-204ENST00000409937 NHP2Q9NX24 153 aaKnown RBP10.73□□□□□ -0.69
CNGA3-204ENST00000409937 A0A1W2PPM0 123 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 C19orf84I3L1E1 186 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 SRD5A1P18405 259 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 EDN2P20800 178 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
CNGA3-204ENST00000409937 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
CNGA3-204ENST00000409937 ATP5G2Q06055 141 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 HIF1ANQ9NWT6 349 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 RBAKDNA6NC62 111 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 DPM2O94777 84 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 NEGR1Q7Z3B1 354 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
CNGA3-204ENST00000409937 LAGE3Q14657 143 aa10.71□□□□□ -0.69
CNGA3-204ENST00000409937 GTF2H5Q6ZYL4 71 aa10.71□□□□□ -0.69
CNGA3-204ENST00000409937 GPHB5Q86YW7 130 aa10.71□□□□□ -0.69
CNGA3-204ENST00000409937 ACACBO00763 2458 aa10.71□□□□□ -0.69
CNGA3-204ENST00000409937 LINC01546A6NGU7 62 aa10.71□□□□□ -0.69
CNGA3-204ENST00000409937 C14orf178Q8N769 122 aaPredicted RBP10.71□□□□□ -0.69
CNGA3-204ENST00000409937 TRAV41A0A0B4J266 112 aa10.71□□□□□ -0.7
CNGA3-204ENST00000409937 SIVA1O15304 175 aa10.71□□□□□ -0.7
CNGA3-204ENST00000409937 MGPP08493 103 aa10.71□□□□□ -0.7
CNGA3-204ENST00000409937 ARL3P36405 182 aa10.71□□□□□ -0.7
CNGA3-204ENST00000409937 CSTL1Q9H114 145 aa10.71□□□□□ -0.7
CNGA3-204ENST00000409937 CSPG4Q6UVK1 2322 aa10.71□□□□□ -0.7
CNGA3-204ENST00000409937 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
CNGA3-204ENST00000409937 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
CNGA3-204ENST00000409937 C9orf47Q6ZRZ4 202 aa10.7□□□□□ -0.7
CNGA3-204ENST00000409937 Q6ZS46 218 aa10.7□□□□□ -0.7
CNGA3-204ENST00000409937 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
CNGA3-204ENST00000409937 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
CNGA3-204ENST00000409937 TRBV7-1A0A0A6YYK4 115 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 K7ERU9 68 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 SMIM13P0DJ93 91 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 CUBNO60494 3623 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 GNRH2O43555 120 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 RAB9AP51151 201 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 U3KQE9 123 aa10.69□□□□□ -0.7
CNGA3-204ENST00000409937 FLNCQ14315 2725 aa10.68□□□□□ -0.7
CNGA3-204ENST00000409937 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
CNGA3-204ENST00000409937 MUC4Q99102 2169 aa10.68□□□□□ -0.7
CNGA3-204ENST00000409937 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
CNGA3-204ENST00000409937 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
CNGA3-204ENST00000409937 ZFAND2AQ8N6M9 145 aa10.68□□□□□ -0.7
CNGA3-204ENST00000409937 PIFOQ8TCI5 191 aa10.68□□□□□ -0.7
CNGA3-204ENST00000409937 RASL10AQ92737 203 aa10.68□□□□□ -0.7
CNGA3-204ENST00000409937 DOPEY2Q9Y3R5 2298 aa10.67□□□□□ -0.7
CNGA3-204ENST00000409937 ATP5LO75964 103 aa10.67□□□□□ -0.7
CNGA3-204ENST00000409937 IGHV4-38-2P0DP08 117 aa10.67□□□□□ -0.7
CNGA3-204ENST00000409937 FABP2P12104 132 aa10.67□□□□□ -0.7
CNGA3-204ENST00000409937 ITLN2Q8WWU7 325 aaPredicted RBP10.67□□□□□ -0.7
CNGA3-204ENST00000409937 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
CNGA3-204ENST00000409937 NPFFR1Q9GZQ6 430 aa10.67□□□□□ -0.7
CNGA3-204ENST00000409937 ZANQ9Y493 2812 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 SORL1Q92673 2214 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 A0A087WX48 190 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 EMP1P54849 157 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 CEND1Q8N111 149 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 PHLDA1Q8WV24 401 aaPredicted RBP10.66□□□□□ -0.7
CNGA3-204ENST00000409937 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 CFAP46Q8IYW2 2715 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 RPL24P83731 157 aaKnown RBP10.66□□□□□ -0.7
CNGA3-204ENST00000409937 JPT2Q9H910 190 aa10.66□□□□□ -0.7
CNGA3-204ENST00000409937 BLCAPP62952 87 aa10.65□□□□□ -0.7
CNGA3-204ENST00000409937 SRSF1Q07955 248 aaKnown RBP eCLIP10.65□□□□□ -0.7
CNGA3-204ENST00000409937 AMTNQ6UX39 209 aa10.65□□□□□ -0.7
CNGA3-204ENST00000409937 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.7
CNGA3-204ENST00000409937 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.65□□□□□ -0.71
CNGA3-204ENST00000409937 PF4V1P10720 104 aa10.65□□□□□ -0.71
CNGA3-204ENST00000409937 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.71
CNGA3-204ENST00000409937 SCGB3A1Q96QR1 104 aa10.65□□□□□ -0.71
CNGA3-204ENST00000409937 PHLDA3Q9Y5J5 127 aa10.65□□□□□ -0.71
CNGA3-204ENST00000409937 IGHV4-61A0A0C4DH41 118 aa10.64□□□□□ -0.71
CNGA3-204ENST00000409937 RNF223E7ERA6 249 aa10.64□□□□□ -0.71
CNGA3-204ENST00000409937 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
CNGA3-204ENST00000409937 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
CNGA3-204ENST00000409937 HIST1H4GQ99525 98 aa10.64□□□□□ -0.71
CNGA3-204ENST00000409937 HIGD1BQ9P298 99 aa10.64□□□□□ -0.71
CNGA3-204ENST00000409937 CENPEQ02224 2701 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
CNGA3-204ENST00000409937 C19orf54Q5BKX5 351 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 MRPL53Q96EL3 112 aaKnown RBP10.63□□□□□ -0.71
CNGA3-204ENST00000409937 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 G3V4G9 280 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 H3BUX3 64 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 SOCS3O14543 225 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 KLK9Q2XQG4 91 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 SFTA2Q6UW10 78 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
CNGA3-204ENST00000409937 IGHV4-4A0A075B6R2 117 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms