RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 KIR2DL5BA0A0G2JPC4 375 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 GCSHP23434 173 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 HOXD3P31249 432 aaPredicted RBP5.64□□□□□ -1.51
CXCR4-202ENST00000409817 C10orf99Q6UWK7 81 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 KIR2DL5AQ8N109 375 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 C4orf3Q8WVX3 66 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 URB1-AS1Q96HZ7 61 aa5.64□□□□□ -1.51
CXCR4-202ENST00000409817 IGHV4OR15-8A0A075B7B6 117 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 A0A087WW49 117 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 TRAV2A0A0B4J234 112 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 CRXO43186 299 aaPredicted RBP5.63□□□□□ -1.51
CXCR4-202ENST00000409817 C3orf79P0CE67 100 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 DEFA6Q01524 100 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 MRPL51Q4U2R6 128 aaKnown RBP5.63□□□□□ -1.51
CXCR4-202ENST00000409817 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 AMN1Q8IY45 258 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 PRSS3P2Q8NHM4 247 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 PRELID3AQ96N28 172 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 C20orf144Q9BQM9 153 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 VAMP8Q9BV40 100 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 MS4A6AQ9H2W1 248 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 PEMTQ9UBM1 199 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 HSPB8Q9UJY1 196 aa5.63□□□□□ -1.51
CXCR4-202ENST00000409817 IGHV1-24A0A0C4DH33 117 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 C2orf70A6NJV1 201 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 KLLNB2CW77 178 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 D6R8Y8 96 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 LINC01619G3V211 115 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 K7EQG2 157 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 LEPROTL1O95214 131 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 CKS2P33552 79 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 SYNJ2BPP57105 145 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 TMEM70Q9BUB7 260 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 TMEM160Q9NX00 188 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 C11orf21Q9P2W6 132 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 ABCA12Q86UK0 2595 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 UTP20O75691 2785 aaKnown RBP5.62□□□□□ -1.51
CXCR4-202ENST00000409817 C20orf202A1L168 122 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 TCF21O43680 179 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 DUSP14O95147 198 aaKnown RBP5.62□□□□□ -1.51
CXCR4-202ENST00000409817 LEPP41159 167 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 ASIPP42127 132 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 CTAG1AP78358 180 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 Q8N976 141 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 OR10AG1Q8NH19 301 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 DPF1Q92782 380 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 PRO1933Q9H354 126 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 SVEP1Q4LDE5 3571 aa5.62□□□□□ -1.51
CXCR4-202ENST00000409817 IGKV3-7A0A075B6H7 116 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 TSPOP30536 169 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 LBHQ53QV2 105 aaPredicted RBP5.61□□□□□ -1.51
CXCR4-202ENST00000409817 PRR9Q5T870 116 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 SPANXN1Q5VSR9 72 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 EBLN2Q6P2I7 272 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 Q6ZSV7 163 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 DEFB125Q8N687 156 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 RNF185Q96GF1 192 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 NDUFAF3Q9BU61 184 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 MAP1LC3AQ9H492 121 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 NXT2Q9NPJ8 142 aaKnown RBP5.61□□□□□ -1.51
CXCR4-202ENST00000409817 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
CXCR4-202ENST00000409817 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
CXCR4-202ENST00000409817 CRYBG3Q68DQ2 2970 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 A0A0J9YX75 114 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 LINC01546A6NGU7 62 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 S100A4P26447 101 aaKnown RBP5.6□□□□□ -1.51
CXCR4-202ENST00000409817 KRTAP1-1Q07627 177 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 FOXI2Q6ZQN5 318 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MRPL52Q86TS9 123 aaKnown RBP5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MAP1LC3CQ9BXW4 147 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 SCRT2Q9NQ03 307 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 SIGLEC8Q9NYZ4 499 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 RNF114Q9Y508 228 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 VPS13CQ709C8 3753 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MUC21A0A0G2JKD1 596 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MUC21A0A140T8X8 626 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 F6UB75 175 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 SYS1-DBNDD2H3BUS1 97 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 CSN3P07498 182 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 SRD5A1P18405 259 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 RNASE4P34096 147 aaKnown RBP5.6□□□□□ -1.51
CXCR4-202ENST00000409817 ZNF124Q15973 351 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 TDRG1Q3Y452 100 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 TCTEX1D4Q5JR98 221 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 PSMG4Q5JS54 123 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MUC21Q5SSG8 566 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 OR11H1Q8NG94 326 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 OR9G4Q8NGQ1 327 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 OR1N2Q8NGR9 330 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MRAP2Q96G30 205 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 DUX5Q96PT3 197 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 C16orf95Q9H693 158 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 YAE1D1Q9NRH1 226 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 MSRB1Q9NZV6 116 aa5.6□□□□□ -1.51
CXCR4-202ENST00000409817 C7orf71A4D174 169 aa5.59□□□□□ -1.51
CXCR4-202ENST00000409817 H3BVH4 76 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms