RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 ATP6V0BQ99437 205 aa11.6□□□□□ -0.55
LYSMD4-204ENST00000409796 UFC1Q9Y3C8 167 aa11.6□□□□□ -0.55
LYSMD4-204ENST00000409796 AKAP6Q13023 2319 aa11.6□□□□□ -0.55
LYSMD4-204ENST00000409796 LMO4P61968 165 aa11.6□□□□□ -0.55
LYSMD4-204ENST00000409796 C9orf47Q6ZRZ4 202 aa11.6□□□□□ -0.55
LYSMD4-204ENST00000409796 NRACQ8N912 160 aa11.6□□□□□ -0.55
LYSMD4-204ENST00000409796 A0A1B0GV72 72 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 NPFFO15130 113 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 TMEM219Q86XT9 240 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 C5orf56Q8N8D9 126 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 IGSF10Q6WRI0 2623 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 GAGE12HA6NDE8 117 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 BPESC1Q9GZL8 116 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 LINC00527Q9UJ94 153 aa11.59□□□□□ -0.55
LYSMD4-204ENST00000409796 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 ATP5LO75964 103 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 EFNA4P52798 201 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 ATP5G2Q06055 141 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 PRR9Q5T870 116 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 HIF1ANQ9NWT6 349 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 SMIM13P0DJ93 91 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 FXYD2P54710 66 aa11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 CD300EQ496F6 205 aaPredicted RBP11.58□□□□□ -0.56
LYSMD4-204ENST00000409796 DPM2O94777 84 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 SPANXN1Q5VSR9 72 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 C16orf92Q96LL3 132 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 C20orf173Q96LM9 149 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 H3BVH4 76 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 K7ERJ3 54 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 GCSHP23434 173 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 UCNP55089 124 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 LAGE3Q14657 143 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
LYSMD4-204ENST00000409796 IGHV4-4A0A075B6R2 117 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 IGF1P05019 195 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 TMEM160Q9NX00 188 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 IGHV3OR16-10A0A075B7F0 116 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 J3KRW8 73 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 CHAC1Q9BUX1 264 aa11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 SPANXB1Q9NS25 103 aaPredicted RBP11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
LYSMD4-204ENST00000409796 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 FOXI2Q6ZQN5 318 aa11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 MYOZ3Q8TDC0 251 aa11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 WFDC2Q14508 124 aa11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 GCN1Q92616 2671 aaKnown RBP11.55□□□□□ -0.56
LYSMD4-204ENST00000409796 TRBV25-1A0A075B6N4 114 aa11.54□□□□□ -0.56
LYSMD4-204ENST00000409796 ITLN2Q8WWU7 325 aaPredicted RBP11.54□□□□□ -0.56
LYSMD4-204ENST00000409796 SPRY2O43597 315 aa11.54□□□□□ -0.56
LYSMD4-204ENST00000409796 C19orf54Q5BKX5 351 aa11.54□□□□□ -0.56
LYSMD4-204ENST00000409796 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 ABCA2Q9BZC7 2435 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 ARL3P36405 182 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 DEFB1P60022 68 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 UNQ9165/PRO28630Q6UXU0 137 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 GPHB5Q86YW7 130 aa11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 SRSF1Q07955 248 aaKnown RBP eCLIP11.53□□□□□ -0.56
LYSMD4-204ENST00000409796 ZFHX3Q15911 3703 aa11.52□□□□□ -0.56
LYSMD4-204ENST00000409796 A0A087WX48 190 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 FAM223BA6NKX1 122 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 CKS1BP61024 79 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 FAM223AQ8IWN6 122 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 MAPKAPK5-AS1Q8N8E1 139 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 K7EMI3 77 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 SH2D6Q7Z4S9 175 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 ZFAND2AQ8N6M9 145 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 MRAP2Q96G30 205 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
LYSMD4-204ENST00000409796 TRAV26-1A0A087WT03 109 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 LENEPQ9Y5L5 61 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 M0R381 172 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 HLA-DRB4P13762 266 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 HLA-DRB4X5D2U9 266 aa11.51□□□□□ -0.57
LYSMD4-204ENST00000409796 HELZ2Q9BYK8 2649 aaKnown RBP11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 ETDBQ3ZM63 59 aa11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 BBC3Q96PG8 261 aaPredicted RBP11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 AGRNO00468 2067 aa11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 F8W1H4 67 aa11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 CRIP2P52943 208 aaPredicted RBP11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 CEND1Q8N111 149 aa11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 LINC00477Q96M19 166 aa11.5□□□□□ -0.57
LYSMD4-204ENST00000409796 E9PLD3 99 aa11.49□□□□□ -0.57
LYSMD4-204ENST00000409796 SOCS3O14543 225 aa11.49□□□□□ -0.57
LYSMD4-204ENST00000409796 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
LYSMD4-204ENST00000409796 RASL10AQ92737 203 aa11.49□□□□□ -0.57
LYSMD4-204ENST00000409796 J3QR89 54 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms