RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PAX2Q02962 417 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 C1orf194Q5T5A4 169 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 C11orf1Q9H5F2 150 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 TOMM7Q9P0U1 55 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 FSTL3O95633 263 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 EBI3Q14213 229 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 MSRB1Q9NZV6 116 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 MUC4Q99102 2169 aa8.71□□□□□ -1.02
SNX13-202ENST00000409604 CXorf65A6NEN9 183 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 K7EN84 100 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 SCGB1D4Q6XE38 83 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 LYPD1Q8N2G4 141 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
SNX13-202ENST00000409604 TMEM160Q9NX00 188 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 A0A0U1RRA0 63 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 COX19Q49B96 90 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 TMEM256Q8N2U0 113 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 IGHV3-64A0A075B6Q5 118 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 H3BUA1 57 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 PFN1P07737 140 aaKnown RBP8.7□□□□□ -1.02
SNX13-202ENST00000409604 PTTG1IPP53801 180 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 Q8N6K4 173 aa8.7□□□□□ -1.02
SNX13-202ENST00000409604 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
SNX13-202ENST00000409604 HILS1P60008 231 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 SAMD13Q5VXD3 122 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 TMEM158Q8WZ71 300 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 GAGE1Q13065 139 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 GAGE4Q13068 117 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 GAGE5Q13069 117 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 C16orf54Q6UWD8 224 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 FRMD6-AS1P0C7T7 363 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
SNX13-202ENST00000409604 TRGV11A0A075B6L2 103 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 DEFA6Q01524 100 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BKO60814 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BJP06899 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BOP23527 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BBP33778 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BDP58876 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BCP62807 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST2H2BEQ16778 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.68□□□□□ -1.02
SNX13-202ENST00000409604 ARL6IP6Q8N6S5 226 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BHQ93079 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BNQ99877 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 HIST1H2BMQ99879 126 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 COLCA2A8K830 154 aa8.68□□□□□ -1.02
SNX13-202ENST00000409604 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 GATA1P15976 413 aaPredicted RBP8.67□□□□□ -1.02
SNX13-202ENST00000409604 SUMO2P61956 95 aaKnown RBP8.67□□□□□ -1.02
SNX13-202ENST00000409604 GDF5OSQ5U4N7 250 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 PRSS2P07478 247 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 NF1P21359 2839 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 GPHB5Q86YW7 130 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 TMEM14CQ9P0S9 112 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 SCGB3A1Q96QR1 104 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 C11orf68Q9H3H3 251 aaKnown RBP8.67□□□□□ -1.02
SNX13-202ENST00000409604 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
SNX13-202ENST00000409604 PSMB8P28062 276 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 TMEM191AQ9H0A3 160 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 APCP25054 2843 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 TRAV8-6A0A0B4J262 113 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 CRXO43186 299 aaPredicted RBP8.66□□□□□ -1.02
SNX13-202ENST00000409604 C4orf3Q8WVX3 66 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 AZU1P20160 251 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 MBD6Q96DN6 1003 aa8.66□□□□□ -1.02
SNX13-202ENST00000409604 A0A087WWC5 75 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 DAD1P61803 113 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 C19orf54Q5BKX5 351 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 SPAG8Q99932 426 aaPredicted RBP8.65□□□□□ -1.02
SNX13-202ENST00000409604 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 CRLF1O75462 422 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 JPT2Q9H910 190 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 H7C1H1 209 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 NIT1Q86X76 327 aa8.65□□□□□ -1.02
SNX13-202ENST00000409604 GEMIN7Q9H840 131 aaKnown RBP8.65□□□□□ -1.02
SNX13-202ENST00000409604 NBEAL2Q6ZNJ1 2754 aa8.65□□□□□ -1.03
SNX13-202ENST00000409604 A0A087WX48 190 aa8.65□□□□□ -1.03
SNX13-202ENST00000409604 C9orf66Q5T8R8 295 aa8.65□□□□□ -1.03
SNX13-202ENST00000409604 COL27A1Q8IZC6 1860 aaPredicted RBP8.64□□□□□ -1.03
SNX13-202ENST00000409604 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
SNX13-202ENST00000409604 Q6ZQT7 251 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 H7C2G1 150 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 RNASE1P07998 156 aaKnown RBP8.64□□□□□ -1.03
SNX13-202ENST00000409604 HNRNPA3P51991 378 aaKnown RBP8.64□□□□□ -1.03
SNX13-202ENST00000409604 U3KQE9 123 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 V9GYV3 84 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 NSD1Q96L73 2696 aaPredicted RBP8.64□□□□□ -1.03
SNX13-202ENST00000409604 F2Z2F3 143 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 IGLC2P0DOY2 106 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms