RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PSMG3-AS1Q96PY0 264 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 UBTD1Q9HAC8 227 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 SCGB2A1O75556 95 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 IGHG4P01861 327 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 TRGV3P03979 118 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 EFNA4P52798 201 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 MORN3Q6PF18 240 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-205ENST00000409455 ZNF418Q8TF45 676 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-205ENST00000409455 C21orf62Q9NYP8 219 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 UFC1Q9Y3C8 167 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 FLNCQ14315 2725 aa11.91□□□□□ -0.5
LIMS2-205ENST00000409455 AKAP6Q13023 2319 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 A6NJY4 79 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 LCNL1Q6ZST4 164 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 IL17RELQ6ZVW7 336 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 TRAV12-1A0A0B4J245 112 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 TRAV26-2A0A0B4J265 109 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 SPINK8P0C7L1 97 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 ERCC8Q13216 396 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 DYNAPQ8N1N2 210 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 NRACQ8N912 160 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 SMAD5-AS1Q9Y6J3 95 aa11.9□□□□□ -0.5
LIMS2-205ENST00000409455 F8W735 103 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-205ENST00000409455 WFDC12Q8WWY7 111 aa11.89□□□□□ -0.51
LIMS2-205ENST00000409455 CFHR4Q92496 578 aa11.89□□□□□ -0.51
LIMS2-205ENST00000409455 CDIP1Q9H305 208 aa11.89□□□□□ -0.51
LIMS2-205ENST00000409455 LY6LH3BQJ8 138 aa11.88□□□□□ -0.51
LIMS2-205ENST00000409455 IGHV3-23P01764 117 aa11.88□□□□□ -0.51
LIMS2-205ENST00000409455 USP9XQ93008 2570 aaPredicted RBP11.88□□□□□ -0.51
LIMS2-205ENST00000409455 TIMD4Q96H15 378 aa11.88□□□□□ -0.51
LIMS2-205ENST00000409455 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
LIMS2-205ENST00000409455 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
LIMS2-205ENST00000409455 TACC2O95359 2948 aa11.87□□□□□ -0.51
LIMS2-205ENST00000409455 LGALS1P09382 135 aaKnown RBP11.87□□□□□ -0.51
LIMS2-205ENST00000409455 DOPEY1Q5JWR5 2465 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 RBAKDNA6NC62 111 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 TMEM78Q5T7P6 136 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 MYO18BQ8IUG5 2567 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 ASH1LQ9NR48 2969 aaKnown RBP11.86□□□□□ -0.51
LIMS2-205ENST00000409455 LOC107984156A0A0G2JMH3 177 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 PRAC2D3DTV9 90 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 PSMB2P49721 201 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
LIMS2-205ENST00000409455 HES1Q14469 280 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 LYRM7Q5U5X0 104 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 SPANXN1Q5VSR9 72 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 Q6ZUT4 128 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 ARL17AQ8IVW1 177 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 NPBQ8NG41 125 aa11.86□□□□□ -0.51
LIMS2-205ENST00000409455 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 SCGB1D4Q6XE38 83 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 SCGB3A1Q96QR1 104 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 SMIM2Q9BVW6 85 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 ONECUT1Q9UBC0 465 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 C5orf64Q2M2E5 130 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 ORMDL2Q53FV1 153 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 KLK15Q9H2R5 256 aa11.85□□□□□ -0.51
LIMS2-205ENST00000409455 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 ZNF815PA8K554 130 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 CTSGP08311 255 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 RNF182Q8N6D2 247 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 OR11H6Q8NGC7 330 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 IGHV7-4-1A0A0J9YVY3 117 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
LIMS2-205ENST00000409455 GLMPQ8WWB7 406 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 PPDPFLQ8WWR9 84 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 PRADC1Q9BSG0 188 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 VCX2Q9H322 139 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 C11orf21Q9P2W6 132 aa11.84□□□□□ -0.51
LIMS2-205ENST00000409455 TSPAN13O95857 204 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 SLC25A16P16260 332 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 XGP55808 180 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 SLC50A1Q9BRV3 221 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 DPM3Q9P2X0 92 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 UBE2D1P51668 147 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 FHL3Q13643 280 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 NEXN-AS1Q8NBZ9 246 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 TOMM6Q96B49 74 aa11.83□□□□□ -0.52
LIMS2-205ENST00000409455 ARHGAP32A7KAX9 2087 aa11.82□□□□□ -0.52
LIMS2-205ENST00000409455 IGHV3-35A0A0C4DH35 117 aa11.82□□□□□ -0.52
LIMS2-205ENST00000409455 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
LIMS2-205ENST00000409455 MED13LQ71F56 2210 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 IGHV4-4A0A075B6R2 117 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 UBE2D3P61077 147 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 UBE2D2P62837 147 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 LY6G5BQ8NDX9 201 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 NDPQ00604 133 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 ZFP2Q6ZN57 461 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
LIMS2-205ENST00000409455 PTH2Q96A98 100 aa11.8□□□□□ -0.52
LIMS2-205ENST00000409455 ERG28Q9UKR5 140 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms