RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SUB1P53999 127 aaKnown RBP eCLIP4.25□□□□□ -1.73
CLK1-202ENST00000409403 DSCR9P59020 149 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 C2orf83Q53S99 150 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 C10orf113Q5VZT2 155 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 ABHD12Q8N2K0 398 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 WFDC11Q8NEX6 87 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 OR1L8Q8NGR8 309 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 FAM167A-AS1Q96KT0 104 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 RASL11BQ9BPW5 248 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 IFI27L2Q9H2X8 130 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 TMEM14BQ9NUH8 114 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 U3KQK5 164 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 HIVEP2P31629 2446 aa4.25□□□□□ -1.73
CLK1-202ENST00000409403 TRAV25A0A0B4J276 109 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 SS18L1O75177 396 aaPredicted RBP4.24□□□□□ -1.73
CLK1-202ENST00000409403 MOSP00540 346 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 IGHG3P01860 377 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 RBP4P02753 201 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 SCGB1C2P0DMR2 95 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 PLNP26678 52 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 MYCNOSP40205 109 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 HES1Q14469 280 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 TMEM78Q5T7P6 136 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 SBSPONQ8IVN8 264 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 LRRC75A-AS1Q8N1F1 130 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 OR13C6PQ8NH95 151 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 ITLN2Q8WWU7 325 aaPredicted RBP4.24□□□□□ -1.73
CLK1-202ENST00000409403 TPPP3Q9BW30 176 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 FGF23Q9GZV9 251 aaPredicted RBP4.24□□□□□ -1.73
CLK1-202ENST00000409403 NXT2Q9NPJ8 142 aaKnown RBP4.24□□□□□ -1.73
CLK1-202ENST00000409403 MDFICQ9P1T7 246 aa4.24□□□□□ -1.73
CLK1-202ENST00000409403 MED12LQ86YW9 2145 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 ZANQ9Y493 2812 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 A0A096LNJ9 63 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 IGHV5-51A0A0C4DH38 117 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 LINC01546A6NGU7 62 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 IFI27P40305 119 aaPredicted RBP4.23□□□□□ -1.73
CLK1-202ENST00000409403 ID1P41134 155 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 ZNF138P52744 262 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 PRCDQ00LT1 54 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 Q86TA4 180 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 FGFBP3Q8TAT2 258 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 C18orf15Q96N68 181 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 OTORQ9NRC9 128 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
CLK1-202ENST00000409403 GTF3C1Q12789 2109 aa4.23□□□□□ -1.73
CLK1-202ENST00000409403 IGLV3-12A0A075B6K2 115 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 TRBV7-3A0A075B6L6 115 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 SPTY2D1-AS1A0A0U1RR47 76 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 MYMXA0A1B0GTQ4 84 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 A0A1B0GX51 115 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 CCDC179H3BU77 68 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 J3KT08 172 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 SCGB2A1O75556 95 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 NPYP01303 97 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 ATP5G1P05496 136 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 KRTAP24-1Q3LI83 254 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 MEIG1Q5JSS6 88 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 AMTNQ6UX39 209 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 LINC00696Q6ZRV3 163 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 NFE4Q86UQ8 179 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 TUSC5Q8IXB3 177 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 CIARTQ8N365 385 aaPredicted RBP4.22□□□□□ -1.73
CLK1-202ENST00000409403 OR11H6Q8NGC7 330 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 ITLN1Q8WWA0 313 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 FXYD5Q96DB9 178 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 SLC25A39Q9BZJ4 359 aaPredicted RBP4.22□□□□□ -1.73
CLK1-202ENST00000409403 UNC13CQ8NB66 2214 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 IGHV4OR15-8A0A075B7B6 117 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 IGHV3-15A0A0B4J1V0 119 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 PGPA6NDG6 321 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 D6R8Y8 96 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 INS-IGF2F8WCM5 200 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 TCRAP04437 139 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 PRSS1P07477 247 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 PRTN3P24158 256 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 FCER1GP30273 86 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 PSMB2P49721 201 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 NANOS2P60321 138 aaKnown RBP4.22□□□□□ -1.73
CLK1-202ENST00000409403 UBE2D3P61077 147 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 UBE2D2P62837 147 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 ERHP84090 104 aaKnown RBP4.22□□□□□ -1.73
CLK1-202ENST00000409403 DIAPH2-AS1Q14236 149 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 PLGLAQ15195 96 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 TMEM30BQ3MIR4 351 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 FAM106AQ4KMX7 169 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 FAM104BQ5XKR9 115 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 OR4C13Q8NGP0 309 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 DEFB126Q9BYW3 111 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 SIGLEC9Q9Y336 463 aa4.22□□□□□ -1.73
CLK1-202ENST00000409403 TRAV8-2A0A0B4J237 113 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 LOC107984156A0A0G2JMH3 177 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 A0A0J9YW62 118 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 WI2-2373I1.2A0A1W2PRP0 233 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 SMIM9A6NGZ8 99 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 PATE4P0C8F1 98 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 CKS2P33552 79 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 CFHR2P36980 270 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 CCL11P51671 97 aa4.21□□□□□ -1.74
CLK1-202ENST00000409403 GFERP55789 205 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms