RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 VAX2Q9UIW0 290 aa14.41□□□□□ -0.1
PTCD3-202ENST00000409326 PDE6DO43924 150 aa14.4□□□□□ -0.1
PTCD3-202ENST00000409326 TMEM183AQ8IXX5 376 aa14.4□□□□□ -0.1
PTCD3-202ENST00000409326 ZC2HC1AQ96GY0 325 aa14.4□□□□□ -0.1
PTCD3-202ENST00000409326 KCNS1Q96KK3 526 aa14.4□□□□□ -0.1
PTCD3-202ENST00000409326 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
PTCD3-202ENST00000409326 C11orf21Q9P2W6 132 aa14.39□□□□□ -0.11
PTCD3-202ENST00000409326 TYMSP04818 313 aa14.38□□□□□ -0.11
PTCD3-202ENST00000409326 RPL35P42766 123 aaKnown RBP14.38□□□□□ -0.11
PTCD3-202ENST00000409326 MDFICQ9P1T7 246 aa14.38□□□□□ -0.11
PTCD3-202ENST00000409326 FABP5P3A8MUU1 101 aa14.37□□□□□ -0.11
PTCD3-202ENST00000409326 SPINK4O60575 86 aa14.37□□□□□ -0.11
PTCD3-202ENST00000409326 Q6ZTI0 123 aa14.37□□□□□ -0.11
PTCD3-202ENST00000409326 DERL1Q9BUN8 251 aa14.37□□□□□ -0.11
PTCD3-202ENST00000409326 TRGV1A0A0A0MS02 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 IGHV3-16A0A0C4DH30 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 GAGE12BA1L429 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 GNRH2O43555 120 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 GAGE7O76087 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 GAGE12FP0CL80 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 GAGE12GP0CL81 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 GAGE12IP0CL82 117 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 CRIP1P50238 77 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 FAM162BQ5T6X4 162 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 BAGE2Q86Y30 109 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 NHLRC2Q8NBF2 726 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 MLST8Q9BVC4 326 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 SACSQ9NZJ4 4579 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 ALMS1Q8TCU4 4167 aa14.36□□□□□ -0.11
PTCD3-202ENST00000409326 RBFOX3A6NFN3 312 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 IGLL5B9A064 214 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 ATP5G1P05496 136 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 HTN3P15516 51 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 TCTAP57738 103 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 ZNF674Q2M3X9 581 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 LGALS9BQ3B8N2 356 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 SPXQ9BT56 116 aa14.35□□□□□ -0.11
PTCD3-202ENST00000409326 MUC4Q99102 2169 aa14.34□□□□□ -0.11
PTCD3-202ENST00000409326 IGHV4-4A0A075B6R2 117 aa14.34□□□□□ -0.11
PTCD3-202ENST00000409326 SH2D1AO60880 128 aa14.34□□□□□ -0.11
PTCD3-202ENST00000409326 ZNF506Q5JVG8 444 aa14.34□□□□□ -0.11
PTCD3-202ENST00000409326 C18orf15Q96N68 181 aa14.34□□□□□ -0.11
PTCD3-202ENST00000409326 MED9Q9NWA0 146 aa14.34□□□□□ -0.11
PTCD3-202ENST00000409326 DNAH1Q9P2D7 4330 aa14.33□□□□□ -0.11
PTCD3-202ENST00000409326 IGKV3D-20A0A0C4DH25 116 aa14.33□□□□□ -0.12
PTCD3-202ENST00000409326 CENPWQ5EE01 88 aa14.33□□□□□ -0.12
PTCD3-202ENST00000409326 FAM210BQ96KR6 192 aa14.33□□□□□ -0.12
PTCD3-202ENST00000409326 MRPL16Q9NX20 251 aaKnown RBP14.33□□□□□ -0.12
PTCD3-202ENST00000409326 APLNQ9ULZ1 77 aa14.32□□□□□ -0.12
PTCD3-202ENST00000409326 TRGV2A0A075B6R0 118 aa14.31□□□□□ -0.12
PTCD3-202ENST00000409326 ORM1P02763 201 aa14.31□□□□□ -0.12
PTCD3-202ENST00000409326 TOR2AQ5JU69 321 aa14.31□□□□□ -0.12
PTCD3-202ENST00000409326 PCNPQ8WW12 178 aaKnown RBP14.31□□□□□ -0.12
PTCD3-202ENST00000409326 SMIM12Q96EX1 92 aa14.31□□□□□ -0.12
PTCD3-202ENST00000409326 FAM210AQ96ND0 272 aa14.31□□□□□ -0.12
PTCD3-202ENST00000409326 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 B4DEV8 164 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 F5H768 121 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 TMEM250H0YL14 139 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 M0R2P5 195 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 GNG4P50150 75 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 LINC01559Q495D7 138 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 RASL10AQ92737 203 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 NDUFAF3Q9BU61 184 aa14.3□□□□□ -0.12
PTCD3-202ENST00000409326 LCE6AA0A183 80 aa14.29□□□□□ -0.12
PTCD3-202ENST00000409326 KRBOX1C9JBD0 128 aa14.29□□□□□ -0.12
PTCD3-202ENST00000409326 M0R036 132 aa14.29□□□□□ -0.12
PTCD3-202ENST00000409326 NDUFS6O75380 124 aaKnown RBP14.29□□□□□ -0.12
PTCD3-202ENST00000409326 RNASE3P12724 160 aaKnown RBP14.29□□□□□ -0.12
PTCD3-202ENST00000409326 TMEM88Q6PEY1 159 aa14.29□□□□□ -0.12
PTCD3-202ENST00000409326 EIF5A2Q9GZV4 153 aaKnown RBP14.29□□□□□ -0.12
PTCD3-202ENST00000409326 TRBV20OR9-2A0A075B6H5 130 aa14.28□□□□□ -0.12
PTCD3-202ENST00000409326 NACAE9PAV3 2078 aa14.28□□□□□ -0.12
PTCD3-202ENST00000409326 IGLV2-8P01709 118 aa14.28□□□□□ -0.12
PTCD3-202ENST00000409326 ASIPP42127 132 aa14.28□□□□□ -0.12
PTCD3-202ENST00000409326 HOXA5P20719 270 aa14.27□□□□□ -0.13
PTCD3-202ENST00000409326 S100A4P26447 101 aaKnown RBP14.27□□□□□ -0.13
PTCD3-202ENST00000409326 DNLZQ5SXM8 178 aa14.27□□□□□ -0.13
PTCD3-202ENST00000409326 PRR27Q6MZM9 219 aa14.27□□□□□ -0.13
PTCD3-202ENST00000409326 LINC00476Q8WZB0 136 aa14.27□□□□□ -0.13
PTCD3-202ENST00000409326 PARLQ9H300 379 aa14.27□□□□□ -0.13
PTCD3-202ENST00000409326 C9JCJ5 164 aa14.26□□□□□ -0.13
PTCD3-202ENST00000409326 PGPEP1LA6NFU8 196 aa14.25□□□□□ -0.13
PTCD3-202ENST00000409326 MGST1P10620 155 aaKnown RBP14.25□□□□□ -0.13
PTCD3-202ENST00000409326 OR5I1Q13606 314 aa14.25□□□□□ -0.13
PTCD3-202ENST00000409326 ZNF575Q86XF7 245 aa14.25□□□□□ -0.13
PTCD3-202ENST00000409326 PTH2Q96A98 100 aa14.25□□□□□ -0.13
PTCD3-202ENST00000409326 IL36BQ9NZH7 164 aa14.25□□□□□ -0.13
PTCD3-202ENST00000409326 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
PTCD3-202ENST00000409326 C15orf53Q8NAA6 179 aa14.24□□□□□ -0.13
PTCD3-202ENST00000409326 VPS13DQ5THJ4 4388 aa14.24□□□□□ -0.13
PTCD3-202ENST00000409326 TRAV4A0A0B4J268 109 aa14.23□□□□□ -0.13
PTCD3-202ENST00000409326 GRIFINA4D1Z8 144 aa14.23□□□□□ -0.13
PTCD3-202ENST00000409326 H3BVH4 76 aa14.23□□□□□ -0.13
PTCD3-202ENST00000409326 IGHV3-53P01767 116 aa14.23□□□□□ -0.13
PTCD3-202ENST00000409326 CXCL1P09341 107 aa14.23□□□□□ -0.13
PTCD3-202ENST00000409326 RPL19P84098 196 aaKnown RBP14.23□□□□□ -0.13
PTCD3-202ENST00000409326 ZNF876PQ49A33 203 aa14.23□□□□□ -0.13
PTCD3-202ENST00000409326 LGALS9CQ6DKI2 356 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms