RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CACNG7P62955 275 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 SCGB2A2Q13296 93 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 SMIM15Q7Z3B0 74 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 Q8N976 141 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 KLHL30-AS1Q8NEE0 82 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 SONP18583 2426 aaKnown RBP18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 RAB4AP20338 218 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 DDTP30046 118 aa18.5■□□□□ 0.55
DNMT3A-206ENST00000406659 H3BVH4 76 aa18.49■□□□□ 0.55
DNMT3A-206ENST00000406659 SPANXN1Q5VSR9 72 aa18.49■□□□□ 0.55
DNMT3A-206ENST00000406659 RNF185Q96GF1 192 aa18.49■□□□□ 0.55
DNMT3A-206ENST00000406659 PEMTQ9UBM1 199 aa18.49■□□□□ 0.55
DNMT3A-206ENST00000406659 KIR3DS1Q14943 382 aa18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 ANXA2RQ3ZCQ2 193 aa18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 EBLN2Q6P2I7 272 aa18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 ADAMTSL5Q6ZMM2 481 aa18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 AP5S1Q9NUS5 200 aa18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 TIMM8BQ9Y5J9 83 aaPredicted RBP18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 ITPR2Q14571 2701 aa18.48■□□□□ 0.55
DNMT3A-206ENST00000406659 LOC389332A0A1B0GUA5 103 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 SMKR1H3BMG3 65 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 PPBPP02775 128 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 BTF3P20290 206 aaKnown RBP18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 ASIPP42127 132 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 DUX3Q96PT4 197 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 IGHV4-4A0A075B6R2 117 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 A0A0J9YX75 114 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 S100A4P26447 101 aaKnown RBP18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 VAMP8Q9BV40 100 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 UNC79Q9P2D8 2635 aa18.47■□□□□ 0.55
DNMT3A-206ENST00000406659 KLLNB2CW77 178 aa18.46■□□□□ 0.55
DNMT3A-206ENST00000406659 LEPROTL1O95214 131 aa18.46■□□□□ 0.55
DNMT3A-206ENST00000406659 IFI27P40305 119 aaPredicted RBP18.46■□□□□ 0.55
DNMT3A-206ENST00000406659 LEPP41159 167 aa18.46■□□□□ 0.55
DNMT3A-206ENST00000406659 SIGLEC8Q9NYZ4 499 aa18.46■□□□□ 0.55
DNMT3A-206ENST00000406659 NCR2O95944 276 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 OR9G4Q8NGQ1 327 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 WFDC12Q8WWY7 111 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 ODF3Q96PU9 254 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 MYO9AB2RTY4 2548 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 NPYP01303 97 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 DEFA6Q01524 100 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 TDRG1Q3Y452 100 aa18.45■□□□□ 0.54
DNMT3A-206ENST00000406659 KIR2DL5BA0A0G2JN68 375 aa18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 KIR2DL5BA0A0G2JPC4 375 aa18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 DUSP14O95147 198 aaKnown RBP18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 RNASE1P07998 156 aaKnown RBP18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 EVI2AP22794 236 aa18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 KIR2DL5AQ8N109 375 aa18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 DLX4Q92988 240 aaPredicted RBP18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 TMEM70Q9BUB7 260 aa18.43■□□□□ 0.54
DNMT3A-206ENST00000406659 TCF21O43680 179 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 MED14OSP0DP75 135 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 LAMTOR2Q9Y2Q5 125 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 PAM16Q9Y3D7 125 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 GNRH2O43555 120 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 IGKV3-20P01619 116 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 HIST2H2BDQ6DRA6 164 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 ZNF418Q8TF45 676 aaPredicted RBP18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 HSPB8Q9UJY1 196 aa18.42■□□□□ 0.54
DNMT3A-206ENST00000406659 C7orf71A4D174 169 aa18.41■□□□□ 0.54
DNMT3A-206ENST00000406659 LINC00173Q6ZV60 143 aa18.41■□□□□ 0.54
DNMT3A-206ENST00000406659 MAP1LC3AQ9H492 121 aa18.41■□□□□ 0.54
DNMT3A-206ENST00000406659 PHLDA3Q9Y5J5 127 aa18.41■□□□□ 0.54
DNMT3A-206ENST00000406659 FAM159AQ6UWV7 190 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 FOXI2Q6ZQN5 318 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 TMEM160Q9NX00 188 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 TRAV12-3A0A0B4J271 114 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 TSPOP30536 169 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 DYNLRB2Q8TF09 96 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 C16orf95Q9H693 158 aa18.4■□□□□ 0.54
DNMT3A-206ENST00000406659 GCN1Q92616 2671 aaKnown RBP18.39■□□□□ 0.53
DNMT3A-206ENST00000406659 M0R381 172 aa18.39■□□□□ 0.53
DNMT3A-206ENST00000406659 C11orf44Q8N8P7 122 aa18.39■□□□□ 0.53
DNMT3A-206ENST00000406659 C20orf144Q9BQM9 153 aa18.39■□□□□ 0.53
DNMT3A-206ENST00000406659 ACANP16112 2415 aa18.39■□□□□ 0.53
DNMT3A-206ENST00000406659 TNFRSF6BO95407 300 aa18.38■□□□□ 0.53
DNMT3A-206ENST00000406659 CD28P10747 220 aa18.38■□□□□ 0.53
DNMT3A-206ENST00000406659 MAP1LC3CQ9BXW4 147 aa18.38■□□□□ 0.53
DNMT3A-206ENST00000406659 SCRT2Q9NQ03 307 aa18.38■□□□□ 0.53
DNMT3A-206ENST00000406659 TRAV2A0A0B4J234 112 aa18.37■□□□□ 0.53
DNMT3A-206ENST00000406659 A0A1W2PRX2 142 aa18.37■□□□□ 0.53
DNMT3A-206ENST00000406659 SYS1-DBNDD2H3BUS1 97 aa18.37■□□□□ 0.53
DNMT3A-206ENST00000406659 RAX2Q96IS3 184 aa18.37■□□□□ 0.53
DNMT3A-206ENST00000406659 AKAP9Q99996 3911 aa18.37■□□□□ 0.53
DNMT3A-206ENST00000406659 GAS8-AS1O95177 125 aa18.37■□□□□ 0.53
DNMT3A-206ENST00000406659 SPRY2O43597 315 aa18.36■□□□□ 0.53
DNMT3A-206ENST00000406659 RNASE3P12724 160 aaKnown RBP18.36■□□□□ 0.53
DNMT3A-206ENST00000406659 LINC01006Q8NI28 216 aa18.36■□□□□ 0.53
DNMT3A-206ENST00000406659 NDUFAF3Q9BU61 184 aa18.36■□□□□ 0.53
DNMT3A-206ENST00000406659 C20orf202A1L168 122 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 CRXO43186 299 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 GATA1P15976 413 aaPredicted RBP18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 CDKN1BP46527 198 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 TMEM61Q8N0U2 210 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 ATOH7Q8N100 152 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 OR2K2Q8NGT1 345 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 C14orf144Q96I85 54 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 DEFB131AP59861 70 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 SPATA45Q537H7 98 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms