RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 MYOZ3Q8TDC0 251 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 DCANP1Q8TF63 244 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 C18orf15Q96N68 181 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 TRAV26-2A0A0B4J265 109 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 A0A0G2JLM5 398 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 COX6B1P14854 86 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 ORMDL2Q53FV1 153 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 TMEM219Q86XT9 240 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 CEND1Q8N111 149 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 C16orf92Q96LL3 132 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 DPH3P1Q9H4G8 78 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 EDA2RQ9HAV5 297 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 ABCA4P78363 2273 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 ACACAQ13085 2346 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 GVINP1Q7Z2Y8 2422 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 ROS1P08922 2347 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 A8MTW9 85 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 E9PLD3 99 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 H7C1H1 209 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 CRYGDP07320 174 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 IGHV4-38-2P0DP08 117 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 PSMB8P28062 276 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 POLR2KP53803 58 aaKnown RBP2.89□□□□□ -1.95
RTN4-209ENST00000405240 SAMD13Q5VXD3 122 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 C9orf85Q96MD7 179 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 FOXC2Q99958 501 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 PIMREGQ9BSJ6 248 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 CHAC1Q9BUX1 264 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 MRPL35Q9NZE8 188 aaKnown RBP2.89□□□□□ -1.95
RTN4-209ENST00000405240 ANKHD1Q8IWZ3 2542 aaKnown RBP2.89□□□□□ -1.95
RTN4-209ENST00000405240 TRBV6-5A0A0K0K1A5 114 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 F8VRH5 84 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 G3V4G9 280 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 ZNF207O43670 478 aaKnown RBP2.89□□□□□ -1.95
RTN4-209ENST00000405240 PPP1R17O96001 155 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 TSHBP01222 138 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 UQCRFS1P47985 274 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 FXYD2P54710 66 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 SUMO2P61956 95 aaKnown RBP2.89□□□□□ -1.95
RTN4-209ENST00000405240 ANXA2RQ3ZCQ2 193 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 TTC28Q96AY4 2481 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 TRAV40A0A0B4J280 105 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 LINC01549A6NIU2 74 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 IGIPA6NJ69 53 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 H3BVH4 76 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 LGALS9O00182 355 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 FSHBP01225 129 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 RIPPLY3P57055 190 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 Q6ZS46 218 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 GTF2H5Q6ZYL4 71 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 SMIM15Q7Z3B0 74 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 ERASQ7Z444 233 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 WFDC3Q8IUB2 231 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 OR10J6PQ8NGY7 276 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 BAALCQ8WXS3 180 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 KLK15Q9H2R5 256 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 CEP250Q9BV73 2442 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 SVEP1Q4LDE5 3571 aa2.89□□□□□ -1.95
RTN4-209ENST00000405240 GAGE10A6NGK3 116 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 SMIM13P0DJ93 91 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 GNLYP22749 145 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 ASIPP42127 132 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 NMUP48645 174 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 ZC2HC1BQ5TFG8 222 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 GTSCR1Q86UQ5 136 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 ZNF256Q9Y2P7 627 aaPredicted RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3OR16-13A0A075B7E8 117 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3-74A0A0B4J1X5 117 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 H3BUT2 72 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 PRSS1P07477 247 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 GATA3P23771 443 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 LY6DQ14210 128 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 SPANXN1Q5VSR9 72 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 DAZ1Q9NQZ3 744 aaKnown RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 TIMM8BQ9Y5J9 83 aaPredicted RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 ABCA1O95477 2261 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 GNRH2O43555 120 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 AVPP01185 164 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 BLCAPP62952 87 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 MORN3Q6PF18 240 aaPredicted RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 RPL39LQ96EH5 51 aaKnown RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 RHPN1-AS1Q9BWJ2 59 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 TTTY13Q9BZ97 58 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 ZFHX2Q9C0A1 2572 aaPredicted RBP2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGHV4-30-2A0A087WSY4 118 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 TRBV27A0A0K0K1C4 114 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 MYMXA0A1B0GTQ4 84 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGLL5B9A064 214 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 H3BUX3 64 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 MSMBP08118 114 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 SAMD5Q5TGI4 173 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 BRD3OSQ6XYD6 125 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 PTH2Q96A98 100 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 AMELXQ99217 191 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 PRO0461Q9UI25 63 aa2.88□□□□□ -1.95
RTN4-209ENST00000405240 IGHV3-16A0A0C4DH30 117 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms