RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
HMGA2-204ENST00000403681 LY6HO94772 140 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 IGHV3-11P01762 117 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 TM2D2Q9BX73 214 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 LINC00527Q9UJ94 153 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 TP53TG1Q9Y2A0 90 aa10.91□□□□□ -0.66
HMGA2-204ENST00000403681 C9orf139Q6ZV77 190 aa10.9□□□□□ -0.66
HMGA2-204ENST00000403681 LINC00477Q96M19 166 aa10.9□□□□□ -0.66
HMGA2-204ENST00000403681 PRO1854Q9UHT4 67 aa10.9□□□□□ -0.66
HMGA2-204ENST00000403681 IGHV3OR16-10A0A075B7F0 116 aa10.9□□□□□ -0.66
HMGA2-204ENST00000403681 ATXN8Q156A1 80 aa10.9□□□□□ -0.66
HMGA2-204ENST00000403681 C2orf82Q6UX34 121 aa10.89□□□□□ -0.67
HMGA2-204ENST00000403681 COL4A2P08572 1712 aa10.89□□□□□ -0.67
HMGA2-204ENST00000403681 Q6ZS92 163 aa10.89□□□□□ -0.67
HMGA2-204ENST00000403681 SLC25A20O43772 301 aa10.89□□□□□ -0.67
HMGA2-204ENST00000403681 LY6EQ16553 131 aa10.89□□□□□ -0.67
HMGA2-204ENST00000403681 B5MCH6 92 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 IGFBPL1Q8WX77 278 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 J3QKU1 62 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 ZNF80P51504 273 aaPredicted RBP10.88□□□□□ -0.67
HMGA2-204ENST00000403681 PMVKQ15126 192 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 SEM1Q6ZVN7 128 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 WI2-2373I1.2A0A1W2PRP0 233 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 SPRY2O43597 315 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 CCL19Q99731 98 aa10.88□□□□□ -0.67
HMGA2-204ENST00000403681 A0A087WWL8 130 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 FOXE3Q13461 319 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 TEN1Q86WV5 123 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 PTH2Q96A98 100 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE5Q13069 117 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE6Q13070 117 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 TET2Q6N021 2002 aaPredicted RBP10.87□□□□□ -0.67
HMGA2-204ENST00000403681 OOSP1A8MZH6 123 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 SRD5A1P18405 259 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 PLEKHB2Q96CS7 222 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 U3KQK5 164 aa10.87□□□□□ -0.67
HMGA2-204ENST00000403681 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 VPS13AQ96RL7 3174 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 IGLV1-47P01700 117 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 TMEM95Q3KNT9 176 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 MAPKAPK5-AS1Q8N8E1 139 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 M0R1W7 72 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
HMGA2-204ENST00000403681 ANKHD1Q8IWZ3 2542 aaKnown RBP10.85□□□□□ -0.67
HMGA2-204ENST00000403681 M0R2P5 195 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 NPC2P61916 151 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 MINOS1Q5TGZ0 78 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 MINOS1-NBL1R4GNA1 71 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 MEIG1Q5JSS6 88 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 IGLV11-55A0A075B6I3 123 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 TRAV12-3A0A0B4J271 114 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 IGLC6P0CF74 106 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 CD28P10747 220 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 TCF15Q12870 199 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 CEP192Q8TEP8 1941 aa10.85□□□□□ -0.67
HMGA2-204ENST00000403681 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
HMGA2-204ENST00000403681 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 NTN5Q8WTR8 489 aaPredicted RBP10.84□□□□□ -0.67
HMGA2-204ENST00000403681 CTSGP08311 255 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 J3QQQ9 107 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 FAM110DQ8TAY7 271 aaPredicted RBP10.84□□□□□ -0.67
HMGA2-204ENST00000403681 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE12JA6NER3 117 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 G3V318 75 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE7O76087 117 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE12FP0CL80 117 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE12GP0CL81 117 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE12IP0CL82 117 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 GAGE4Q13068 117 aa10.84□□□□□ -0.67
HMGA2-204ENST00000403681 IFITM1P13164 125 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 WT1P19544 449 aaPredicted RBP10.83□□□□□ -0.68
HMGA2-204ENST00000403681 Q71RC1 249 aaPredicted RBP10.83□□□□□ -0.68
HMGA2-204ENST00000403681 OTOGLQ3ZCN5 2332 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 TRAV12-1A0A0B4J245 112 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 ZNF876PQ49A33 203 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 CLUHP3Q96NS8 147 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 TRAV41A0A0B4J266 112 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 TMEM219Q86XT9 240 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 TMEM141Q96I45 108 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 SPXQ9BT56 116 aa10.83□□□□□ -0.68
HMGA2-204ENST00000403681 RBAKDNA6NC62 111 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 SDHAF1A6NFY7 115 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 DSCAMO60469 2012 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 MT-ATP8P03928 68 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 A0A096LNJ9 63 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 H3BMM0 161 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 UBE2WQ96B02 151 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 IGKV3D-20A0A0C4DH25 116 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 NPFFO15130 113 aa10.82□□□□□ -0.68
HMGA2-204ENST00000403681 IGFL2Q6UWQ7 119 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms