RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	GEMIN7	Q9H840	131 aa	Known RBP	4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	GSN-AS1	Q9NRJ2	163 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PRO0255	Q9UI72	69 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	FUT9	Q9Y231	359 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	NACA	E9PAV3	2078 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	UBR4	Q5T4S7	5183 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	IGLV9-49	A0A0B4J1Y8	123 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ANKRD20A5P	A0PJZ0	165 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	C7orf71	A4D174	169 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	GOSR2	O14653	212 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ZNF324	O75467	553 aa	Predicted RBP	4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	IGHV3-53	P01767	116 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SLC25A5	P05141	298 aa	Known RBP	4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CFC1B	P0CG36	223 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CFC1	P0CG37	223 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PRB4	P10163	310 aa	Predicted RBP	4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	RRAS2	P62070	204 aa	Predicted RBP	4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	GUK1	Q16774	197 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	KIAA1644	Q3SXP7	199 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LINC00305	Q7Z4B0	112 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LRTM2	Q8N967	370 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	NPVF	Q9HCQ7	196 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PSENEN	Q9NZ42	101 aa		4.55	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MYCBP2	O75592	4640 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TRAV5	A0A0B4J249	113 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TRGV4	A0A0C4DH28	118 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461		A0A1W2PPV4	95 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461		K7EPK0	472 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SSSCA1	O60232	199 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ORM1	P02763	201 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CRYGD	P07320	174 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SNRPC	P09234	159 aa	Known RBP	4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	RAB31	Q13636	194 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	IBA57	Q5T440	356 aa	Known RBP	4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CD164L2	Q6UWJ8	174 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LYPD5	Q6UWN5	251 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	EIF4E3	Q8N5X7	224 aa	Known RBP	4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	OR10P1	Q8NGE3	313 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MCFD2	Q8NI22	146 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ZNF431	Q8TF32	576 aa	Predicted RBP	4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	DEFB104A	Q8WTQ1	72 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	VGLL1	Q99990	258 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TXNDC17	Q9BRA2	123 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CCDC59	Q9P031	241 aa	Known RBP	4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	HHLA3	Q9XRX5	114 aa		4.54	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LOC105371267	A0A1B0GV96	52 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CCDC160	A6NGH7	325 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	FNDC10	F2Z333	226 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461		H3BTX0	84 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SPINK4	O60575	86 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MPDU1	O75352	247 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SFT2D2	O95562	160 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	OR4E1	P0C645	316 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CT45A10	P0DMU9	189 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	CRYBA4	P53673	196 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TCL1A	P56279	114 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SEC61G	P60059	68 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	HAMP	P81172	84 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SLC38A11	Q08AI6	406 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ZNF876P	Q49A33	203 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	C10orf113	Q5VZT2	155 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461		Q6ZRG5	221 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SH2D6	Q7Z4S9	175 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SLC51B	Q86UW2	128 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	C11orf72	Q8NBR9	251 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MRPL53	Q96EL3	112 aa	Known RBP	4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LINC00477	Q96M19	166 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	GGACT	Q9BVM4	153 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MIXL1	Q9H2W2	232 aa		4.53	□□□□□ -1.68
CEACAM1-208	ENST00000403461	FLG2	Q5D862	2391 aa	Predicted RBP	4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461		C9JCJ5	164 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461		E5RGE8	158 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	SLC17A3	O00476	420 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	AGPAT2	O15120	278 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	MRPS12	O15235	138 aa	Known RBP	4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	C1QB	P02746	253 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	GPX1	P07203	203 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	METTL15P1	P0C7V9	234 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	IGLC2	P0DOY2	106 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	HIST1H1E	P10412	219 aa	Known RBP	4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	RNASE4	P34096	147 aa	Known RBP	4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	ZNF415	Q09FC8	603 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	PPP1R1A	Q13522	171 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	NDUFA5	Q16718	116 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	PATE2	Q6UY27	113 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	WFDC10B	Q8IUB3	73 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	TOMM5	Q8N4H5	51 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	OR4C5	Q8NGB2	326 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	OR1L4	Q8NGR5	311 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	RAB2B	Q8WUD1	216 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	DEDD2	Q8WXF8	326 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	SMIM8	Q96KF7	97 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	PFDN5	Q99471	154 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	MRPL16	Q9NX20	251 aa	Known RBP	4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	KLF12	Q9Y4X4	402 aa		4.52	□□□□□ -1.69
CEACAM1-208	ENST00000403461	IGHV1OR15-1	A0A075B7D0	117 aa		4.51	□□□□□ -1.69
CEACAM1-208	ENST00000403461	TRAV8-6	A0A0B4J262	113 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms