RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 KIR3DS1Q14943 382 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 DPF1Q92782 380 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 CITED1Q99966 193 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 PIMREGQ9BSJ6 248 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 AGPAT4-IT1Q9H0P7 198 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 LMO4P61968 165 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 C8orf86Q6ZUL3 223 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 SMIM20Q8N5G0 67 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 OR10J6PQ8NGY7 276 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 MOB4Q9Y3A3 225 aa5.95□□□□□ -1.46
HDAC9-201ENST00000401921 TRAV26-2A0A0B4J265 109 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 IGKV3-20P01619 116 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 FOXC2Q99958 501 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 TMEM160Q9NX00 188 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 WNK1Q9H4A3 2382 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 OR11H12B2RN74 326 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 GATA3P23771 443 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 OR11H1Q8NG94 326 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 OR11H2Q8NH07 326 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 SVEP1Q4LDE5 3571 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 SONP18583 2426 aaKnown RBP5.94□□□□□ -1.46
HDAC9-201ENST00000401921 SETD2Q9BYW2 2564 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-201ENST00000401921 TRBV7-1A0A0A6YYK4 115 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 TNFRSF6BO95407 300 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 FOXE3Q13461 319 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 Q8N6K4 173 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 MYOZ3Q8TDC0 251 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 ITLN2Q8WWU7 325 aaPredicted RBP5.94□□□□□ -1.46
HDAC9-201ENST00000401921 CCDC140Q96MF4 163 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 MS4A6AQ9H2W1 248 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 SCRT2Q9NQ03 307 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 PHLDA3Q9Y5J5 127 aa5.94□□□□□ -1.46
HDAC9-201ENST00000401921 IGHV4-61A0A0C4DH41 118 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 TRBV6-1A0A0K0K1D8 114 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 B5MCH6 92 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 F5H697 171 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 IGHV4-39P01824 125 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 RNF183Q96D59 192 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 TSPAN13O95857 204 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 RNASE4P34096 147 aaKnown RBP5.93□□□□□ -1.46
HDAC9-201ENST00000401921 EBI3Q14213 229 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 TMEM158Q8WZ71 300 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 DKK2Q9UBU2 259 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 LRRK2Q5S007 2527 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 CCDC168Q8NDH2 2452 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 IGHV1-69DA0A0B4J2H0 117 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 A1L4Q6 167 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 F6UB75 175 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 GAS8-AS1O95177 125 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 TRBV12-3P01733 135 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 IGHV1-69P01742 117 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 SPINK8P0C7L1 97 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 IGHV4-38-2P0DP08 117 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 GCSHP23434 173 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 BLCAPP62952 87 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 SAMD5Q5TGI4 173 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 C5orf56Q8N8D9 126 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 MAPK1IP1LQ8NDC0 245 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 SPATA25Q9BR10 227 aa5.93□□□□□ -1.46
HDAC9-201ENST00000401921 HRNRQ86YZ3 2850 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-201ENST00000401921 GAGE5Q13069 117 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 GAGE6Q13070 117 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 LINC01545Q5VT33 79 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 Q6ZQT7 251 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 ZNF418Q8TF45 676 aaPredicted RBP5.92□□□□□ -1.46
HDAC9-201ENST00000401921 NACAE9PAV3 2078 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 SIVA1O15304 175 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 HTN1P15515 57 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 NRGNQ92686 78 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 FAM110AQ9BQ89 295 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 NXT2Q9NPJ8 142 aaKnown RBP5.92□□□□□ -1.46
HDAC9-201ENST00000401921 BSNQ9UPA5 3926 aa5.92□□□□□ -1.46
HDAC9-201ENST00000401921 ETDBQ3ZM63 59 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 UNQ9165/PRO28630Q6UXU0 137 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 GTSCR1Q86UQ5 136 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 OR4X2Q8NGF9 303 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 ZFAND3Q9H8U3 227 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 NAV2Q8IVL1 2488 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 OVOL3O00110 214 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 CRXO43186 299 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-201ENST00000401921 IGF1P05019 195 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 COX8AP10176 69 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 ZNF493Q6ZR52 646 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 C14orf178Q8N769 122 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-201ENST00000401921 CYSLTR1Q9Y271 337 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 IGKV3D-20A0A0C4DH25 116 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 SH2D6Q7Z4S9 175 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 TMEM190Q8WZ59 177 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 SPAG8Q99932 426 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-201ENST00000401921 TTTY13Q9BZ97 58 aa5.91□□□□□ -1.46
HDAC9-201ENST00000401921 IGHG4P01861 327 aa5.9□□□□□ -1.46
HDAC9-201ENST00000401921 WFDC2Q14508 124 aa5.9□□□□□ -1.46
HDAC9-201ENST00000401921 PCP2Q8IVA1 136 aa5.9□□□□□ -1.46
HDAC9-201ENST00000401921 RHPN1-AS1Q9BWJ2 59 aa5.9□□□□□ -1.46
HDAC9-201ENST00000401921 ABCA12Q86UK0 2595 aa5.9□□□□□ -1.46
HDAC9-201ENST00000401921 IGHV4-30-2A0A087WSY4 118 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms