RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 FAM19A5Q7Z5A7 132 aaPredicted RBP12.81□□□□□ -0.36
NPRL3-201ENST00000399953 DEFB108BQ8NET1 73 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 RNF125Q96EQ8 232 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 SMIM2Q9BVW6 85 aa12.81□□□□□ -0.36
NPRL3-201ENST00000399953 I3L2K1 104 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 HERVK_113P61574 105 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 ERCC8Q13216 396 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 Q6ZS46 218 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 ZNF491Q8N8L2 437 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 FAM240AA0A1B0GVK7 77 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 TMEM101Q96IK0 257 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 UBTD1Q9HAC8 227 aa12.8□□□□□ -0.36
NPRL3-201ENST00000399953 A0A1B0GX51 115 aa12.79□□□□□ -0.36
NPRL3-201ENST00000399953 EMP1P54849 157 aa12.79□□□□□ -0.36
NPRL3-201ENST00000399953 C3orf22Q8N5N4 141 aa12.79□□□□□ -0.36
NPRL3-201ENST00000399953 ABCA1O95477 2261 aa12.79□□□□□ -0.36
NPRL3-201ENST00000399953 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
NPRL3-201ENST00000399953 Q6ZT83 130 aa12.79□□□□□ -0.36
NPRL3-201ENST00000399953 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
NPRL3-201ENST00000399953 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
NPRL3-201ENST00000399953 GVINP1Q7Z2Y8 2422 aa12.78□□□□□ -0.36
NPRL3-201ENST00000399953 HERVK_113P63121 156 aa12.78□□□□□ -0.36
NPRL3-201ENST00000399953 FAM236AA0A1B0GUQ0 79 aa12.77□□□□□ -0.36
NPRL3-201ENST00000399953 FAM236BA0A1B0GV22 79 aa12.77□□□□□ -0.36
NPRL3-201ENST00000399953 SPRY3O43610 288 aa12.77□□□□□ -0.36
NPRL3-201ENST00000399953 ENSAO43768 121 aaKnown RBP12.77□□□□□ -0.36
NPRL3-201ENST00000399953 IGHV4-39P01824 125 aa12.77□□□□□ -0.36
NPRL3-201ENST00000399953 TCF15Q12870 199 aa12.77□□□□□ -0.36
NPRL3-201ENST00000399953 TMEM263Q8WUH6 116 aaKnown RBP12.77□□□□□ -0.36
NPRL3-201ENST00000399953 H7C2G1 150 aa12.77□□□□□ -0.37
NPRL3-201ENST00000399953 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.37
NPRL3-201ENST00000399953 SMG1Q96Q15 3661 aaKnown RBP12.77□□□□□ -0.37
NPRL3-201ENST00000399953 A4D1N5 150 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 EBI3Q14213 229 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 MSMPQ1L6U9 139 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 ATMQ13315 3056 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 A0A0B4J2C4 111 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 UQCRQO14949 82 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 OR13C6PQ8NH95 151 aa12.76□□□□□ -0.37
NPRL3-201ENST00000399953 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
NPRL3-201ENST00000399953 ADIPOQQ15848 244 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 C2orf82Q6UX34 121 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 SPANXDQ9BXN6 97 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 IMUPQ9GZP8 106 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 MGAQ8IWI9 3026 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 TEX22C9J3V5 150 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 CD3EP07766 207 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 ELANEP08246 267 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 CCL3L1P16619 93 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 Q1RN00 199 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 TRGV11A0A075B6L2 103 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 IGHV1-18A0A0C4DH31 117 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 IGLV1-44P01699 117 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 IGHG3P01860 377 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 PMVKQ15126 192 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 PAPPA-AS1Q5QFB9 102 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 C2orf66Q6UXQ4 117 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 DEFB127Q9H1M4 99 aa12.75□□□□□ -0.37
NPRL3-201ENST00000399953 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
NPRL3-201ENST00000399953 CFHR4Q92496 578 aa12.74□□□□□ -0.37
NPRL3-201ENST00000399953 LINC00526Q96FQ7 95 aa12.74□□□□□ -0.37
NPRL3-201ENST00000399953 DKK4Q9UBT3 224 aa12.74□□□□□ -0.37
NPRL3-201ENST00000399953 IGHV3-72A0A0B4J1Y9 119 aa12.73□□□□□ -0.37
NPRL3-201ENST00000399953 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
NPRL3-201ENST00000399953 C1orf162Q8NEQ5 155 aaPredicted RBP12.73□□□□□ -0.37
NPRL3-201ENST00000399953 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
NPRL3-201ENST00000399953 RP1L1Q8IWN7 2480 aaPredicted RBP12.73□□□□□ -0.37
NPRL3-201ENST00000399953 GATA4P43694 442 aa12.73□□□□□ -0.37
NPRL3-201ENST00000399953 LINC00311Q8N616 119 aa12.73□□□□□ -0.37
NPRL3-201ENST00000399953 SPANXCQ9NY87 97 aa12.73□□□□□ -0.37
NPRL3-201ENST00000399953 CRYGBP07316 175 aa12.72□□□□□ -0.37
NPRL3-201ENST00000399953 IGKV3D-20A0A0C4DH25 116 aa12.72□□□□□ -0.37
NPRL3-201ENST00000399953 RBAKDNA6NC62 111 aa12.72□□□□□ -0.37
NPRL3-201ENST00000399953 H3BT86 120 aa12.72□□□□□ -0.37
NPRL3-201ENST00000399953 CNTFRP26992 372 aa12.72□□□□□ -0.37
NPRL3-201ENST00000399953 TSPEAR-AS2P59090 65 aa12.72□□□□□ -0.37
NPRL3-201ENST00000399953 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
NPRL3-201ENST00000399953 RPS28P62857 69 aaKnown RBP12.72□□□□□ -0.37
NPRL3-201ENST00000399953 CITED2Q99967 270 aaPredicted RBP12.72□□□□□ -0.37
NPRL3-201ENST00000399953 K7EIM0 57 aa12.71□□□□□ -0.37
NPRL3-201ENST00000399953 TMEM170BQ5T4T1 132 aa12.71□□□□□ -0.37
NPRL3-201ENST00000399953 SAP25Q8TEE9 199 aa12.71□□□□□ -0.37
NPRL3-201ENST00000399953 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.37
NPRL3-201ENST00000399953 DEFB121Q5J5C9 76 aa12.71□□□□□ -0.38
NPRL3-201ENST00000399953 TEX36Q5VZQ5 186 aa12.71□□□□□ -0.38
NPRL3-201ENST00000399953 CNEP1R1Q8N9A8 125 aa12.71□□□□□ -0.38
NPRL3-201ENST00000399953 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.38
NPRL3-201ENST00000399953 IGLV4-69A0A075B6H9 119 aa12.7□□□□□ -0.38
NPRL3-201ENST00000399953 TRGV5A0A0B4J1U4 118 aa12.7□□□□□ -0.38
NPRL3-201ENST00000399953 TRBV30A0A0K0K1B3 111 aa12.7□□□□□ -0.38
NPRL3-201ENST00000399953 TMEM219Q86XT9 240 aa12.7□□□□□ -0.38
NPRL3-201ENST00000399953 C8orf31Q8N9H6 132 aa12.7□□□□□ -0.38
NPRL3-201ENST00000399953 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
NPRL3-201ENST00000399953 BEX4Q9NWD9 120 aaPredicted RBP12.7□□□□□ -0.38
NPRL3-201ENST00000399953 KLK5Q9Y337 293 aaPredicted RBP12.7□□□□□ -0.38
NPRL3-201ENST00000399953 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms