RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SHISA2Q6UWI4 295 aa8.72□□□□□ -1.01
CACNA1C-210ENST00000399606 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
CACNA1C-210ENST00000399606 C9orf118A6NHY6 69 aa8.72□□□□□ -1.01
CACNA1C-210ENST00000399606 C16orf74Q96GX8 76 aa8.72□□□□□ -1.01
CACNA1C-210ENST00000399606 GREB1Q4ZG55 1949 aa8.72□□□□□ -1.01
CACNA1C-210ENST00000399606 TRBV6-6A0A0A6YYG2 114 aa8.71□□□□□ -1.01
CACNA1C-210ENST00000399606 ASPHD1Q5U4P2 390 aa8.71□□□□□ -1.01
CACNA1C-210ENST00000399606 AMTNQ6UX39 209 aa8.71□□□□□ -1.01
CACNA1C-210ENST00000399606 F8W1H4 67 aa8.71□□□□□ -1.01
CACNA1C-210ENST00000399606 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.01
CACNA1C-210ENST00000399606 Q0VG73 95 aa8.71□□□□□ -1.01
CACNA1C-210ENST00000399606 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.02
CACNA1C-210ENST00000399606 B5MCH6 92 aa8.71□□□□□ -1.02
CACNA1C-210ENST00000399606 K7EM74 188 aa8.71□□□□□ -1.02
CACNA1C-210ENST00000399606 ORMDL1Q9P0S3 153 aa8.71□□□□□ -1.02
CACNA1C-210ENST00000399606 Q86TA4 180 aa8.71□□□□□ -1.02
CACNA1C-210ENST00000399606 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.02
CACNA1C-210ENST00000399606 MYCNOSP40205 109 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 TMEM75Q8N9X5 138 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 PYGO2Q9BRQ0 406 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 IGLV2-18A0A075B6J9 118 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 B9D2Q9BPU9 175 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 A0A087WV48 116 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 TEX36Q5VZQ5 186 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 Q8N8P6 123 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 CFHR4Q92496 578 aa8.7□□□□□ -1.02
CACNA1C-210ENST00000399606 LINC00205P59089 165 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 SH2D6Q7Z4S9 175 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 HS3ST6Q96QI5 342 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 PTPRDP23468 1912 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 EP300Q09472 2414 aaPredicted RBP8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 CEND1Q8N111 149 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 IGF2-ASQ6U949 168 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 FOXI2Q6ZQN5 318 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 DYNAPQ8N1N2 210 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 KIR2DL5BA0A0G2JN68 375 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 KIR2DL5BA0A0G2JPC4 375 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 KIR2DL5AQ8N109 375 aa8.69□□□□□ -1.02
CACNA1C-210ENST00000399606 DNAJC9-AS1A6NH13 148 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 C5orf24Q7Z6I8 188 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 ARFGEF3Q5TH69 2177 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 HEATR1Q9H583 2144 aaKnown RBP8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 TMEM14EPQ6UXP3 125 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 TICRRQ7Z2Z1 1910 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 LY6G6EA0A0G2JKS1 128 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 IGKV1-27A0A075B6S5 117 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 ZNF134P52741 427 aa8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
CACNA1C-210ENST00000399606 PRSS46E5RG02 174 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 VSIG2Q96IQ7 327 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 GOLGB1Q14789 3259 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 DOCK7Q96N67 2140 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 FOXL2NBQ6ZUU3 175 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 ZNF843Q8N446 348 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 NLRC5Q86WI3 1866 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 CHD3Q12873 2000 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 K7EP34 96 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 LY6G6DO95868 133 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 IGLL1P15814 213 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 NTF4P34130 210 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 MLANAQ16655 118 aa8.67□□□□□ -1.02
CACNA1C-210ENST00000399606 PSMB8P28062 276 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 ODF1Q14990 250 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 C1orf147Q96MC9 270 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 TET1Q8NFU7 2136 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 B3GALT5-AS1P59052 145 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 C5orf63A6NC05 138 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 C10orf105Q8TEF2 133 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 MRPL53Q96EL3 112 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 IGKV1D-8A0A087WSZ0 117 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 HERVK_113P63121 156 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 SMIM20Q8N5G0 67 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 PRO1854Q9UHT4 67 aa8.66□□□□□ -1.02
CACNA1C-210ENST00000399606 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 WIPF3A6NGB9 483 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 ADORA2A-AS1P86434 159 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 ARID1AO14497 2285 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 USP17L23D6RBM5 183 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 NDUFA11Q86Y39 141 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 H3BMG7 143 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 NREPQ16612 68 aa8.65□□□□□ -1.02
CACNA1C-210ENST00000399606 PRORYQ9H606 182 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms