RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 BAGE2Q86Y30 109 aa12.58□□□□□ -0.4
CTNS-203ENST00000399306 C18orf15Q96N68 181 aa12.58□□□□□ -0.4
CTNS-203ENST00000399306 FAM210AQ96ND0 272 aa12.58□□□□□ -0.4
CTNS-203ENST00000399306 SPXQ9BT56 116 aa12.58□□□□□ -0.4
CTNS-203ENST00000399306 NOP10Q9NPE3 64 aaKnown RBP12.58□□□□□ -0.4
CTNS-203ENST00000399306 TCTAP57738 103 aa12.57□□□□□ -0.4
CTNS-203ENST00000399306 ZNF674Q2M3X9 581 aa12.57□□□□□ -0.4
CTNS-203ENST00000399306 FAM162BQ5T6X4 162 aa12.57□□□□□ -0.4
CTNS-203ENST00000399306 ZC2HC1AQ96GY0 325 aa12.57□□□□□ -0.4
CTNS-203ENST00000399306 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
CTNS-203ENST00000399306 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
CTNS-203ENST00000399306 SPINK4O60575 86 aa12.56□□□□□ -0.4
CTNS-203ENST00000399306 MUC21Q5SSG8 566 aa12.56□□□□□ -0.4
CTNS-203ENST00000399306 ZFAND6Q6FIF0 208 aa12.56□□□□□ -0.4
CTNS-203ENST00000399306 MED9Q9NWA0 146 aa12.56□□□□□ -0.4
CTNS-203ENST00000399306 SMDT1Q9H4I9 107 aa12.55□□□□□ -0.4
CTNS-203ENST00000399306 IGHV3-16A0A0C4DH30 117 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 TYMSP04818 313 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 CRIP1P50238 77 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 PLECQ15149 4684 aaKnown RBP12.54□□□□□ -0.4
CTNS-203ENST00000399306 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 ZNF767PQ75MW2 155 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 NDUFAF3Q9BU61 184 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 DERL1Q9BUN8 251 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 BIN3Q9NQY0 253 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 C11orf21Q9P2W6 132 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 NAGKQ9UJ70 344 aa12.54□□□□□ -0.4
CTNS-203ENST00000399306 TENM2Q9NT68 2774 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 C9JCJ5 164 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 GNG4P50150 75 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 CENPWQ5EE01 88 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 PTH2Q96A98 100 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
CTNS-203ENST00000399306 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
CTNS-203ENST00000399306 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 SH2D1AO60880 128 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 ATP5G1P05496 136 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 CXCL1P09341 107 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 DEFB130BP0DP73 79 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 DEFB130AP0DP74 79 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 TOR2AQ5JU69 321 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 RASL10AQ92737 203 aa12.52□□□□□ -0.41
CTNS-203ENST00000399306 GNRH2O43555 120 aa12.51□□□□□ -0.41
CTNS-203ENST00000399306 IGLV2-8P01709 118 aa12.51□□□□□ -0.41
CTNS-203ENST00000399306 RAB14P61106 215 aa12.51□□□□□ -0.41
CTNS-203ENST00000399306 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
CTNS-203ENST00000399306 MUC4Q99102 2169 aa12.51□□□□□ -0.41
CTNS-203ENST00000399306 B4DEV8 164 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 M0R2P5 195 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 ORM1P02763 201 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 Q6ZTI0 123 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 PARLQ9H300 379 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 LY96Q9Y6Y9 160 aa12.5□□□□□ -0.41
CTNS-203ENST00000399306 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 GAGE12BA1L429 117 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 GAGE7O76087 117 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 GAGE12FP0CL80 117 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 GAGE12GP0CL81 117 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 GAGE12IP0CL82 117 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 IL36BQ9NZH7 164 aa12.49□□□□□ -0.41
CTNS-203ENST00000399306 RAB19A4D1S5 217 aa12.48□□□□□ -0.41
CTNS-203ENST00000399306 ASIPP42127 132 aa12.48□□□□□ -0.41
CTNS-203ENST00000399306 PEA15Q15121 130 aa12.48□□□□□ -0.41
CTNS-203ENST00000399306 CLLU1Q5K131 121 aa12.48□□□□□ -0.41
CTNS-203ENST00000399306 LYSTQ99698 3801 aa12.48□□□□□ -0.41
CTNS-203ENST00000399306 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
CTNS-203ENST00000399306 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
CTNS-203ENST00000399306 CIDEAO60543 219 aa12.47□□□□□ -0.41
CTNS-203ENST00000399306 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
CTNS-203ENST00000399306 MED14OSP0DP75 135 aa12.47□□□□□ -0.41
CTNS-203ENST00000399306 RNASE3P12724 160 aaKnown RBP12.47□□□□□ -0.41
CTNS-203ENST00000399306 S100A4P26447 101 aaKnown RBP12.47□□□□□ -0.41
CTNS-203ENST00000399306 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
CTNS-203ENST00000399306 ZNF575Q86XF7 245 aa12.46□□□□□ -0.41
CTNS-203ENST00000399306 PCNPQ8WW12 178 aaKnown RBP12.46□□□□□ -0.41
CTNS-203ENST00000399306 DAZAP1Q96EP5 407 aaKnown RBP12.46□□□□□ -0.41
CTNS-203ENST00000399306 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 IGLL5B9A064 214 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 H3BNG1 76 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
CTNS-203ENST00000399306 RPS20P60866 119 aaKnown RBP12.45□□□□□ -0.42
CTNS-203ENST00000399306 IFITM2Q01629 132 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 SLAQ13239 276 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 SCRT2Q9NQ03 307 aa12.45□□□□□ -0.42
CTNS-203ENST00000399306 MRPL16Q9NX20 251 aaKnown RBP12.45□□□□□ -0.42
CTNS-203ENST00000399306 TRAV4A0A0B4J268 109 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 F5H768 121 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 M0R036 132 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 OR5I1Q13606 314 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 PRR27Q6MZM9 219 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 SMIM7Q9BQ49 75 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 APLNQ9ULZ1 77 aa12.44□□□□□ -0.42
CTNS-203ENST00000399306 XKRY2A2RUG3 117 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms