RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 NRACQ8N912 160 aa11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 KLK9Q9UKQ9 250 aa11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 A1L4Q6 167 aa11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 RPL11P62913 178 aaKnown RBP11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 SPANXN1Q5VSR9 72 aa11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
CCDC144A-205ENST00000399264 PPBPP02775 128 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 RAB9AP51151 201 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 C9orf47Q6ZRZ4 202 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 M0R381 172 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 C19orf54Q5BKX5 351 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 MOB4Q9Y3A3 225 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 MUC4Q99102 2169 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 MYO9AB2RTY4 2548 aa11.04□□□□□ -0.64
CCDC144A-205ENST00000399264 ANKRD17O75179 2603 aaKnown RBP11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 IGHV1-69DA0A0B4J2H0 117 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 H3BUT2 72 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 IGHV1-69P01742 117 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 OR1N2Q8NGR9 330 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 PCP4P48539 62 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 Q8N8P6 123 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 NXT2Q9NPJ8 142 aaKnown RBP11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 CBY1Q9Y3M2 126 aa11.03□□□□□ -0.64
CCDC144A-205ENST00000399264 PTPN13Q12923 2485 aa11.02□□□□□ -0.64
CCDC144A-205ENST00000399264 H3BUX3 64 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 DPF1Q92782 380 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 TEX15Q9BXT5 2789 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 S100A7P31151 101 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 TMEM95Q3KNT9 176 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 ZFAND2AQ8N6M9 145 aa11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
CCDC144A-205ENST00000399264 LINC01546A6NGU7 62 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 GNRH2O43555 120 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 ZC2HC1BQ5TFG8 222 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 NRGNQ92686 78 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 PF4V1P10720 104 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 PEF1Q9UBV8 284 aaKnown RBP11.01□□□□□ -0.65
CCDC144A-205ENST00000399264 AVPP01185 164 aa11□□□□□ -0.65
CCDC144A-205ENST00000399264 RNASE4P34096 147 aaKnown RBP11□□□□□ -0.65
CCDC144A-205ENST00000399264 FXYD2P54710 66 aa11□□□□□ -0.65
CCDC144A-205ENST00000399264 SEC11AP67812 179 aa11□□□□□ -0.65
CCDC144A-205ENST00000399264 MAPKAPK5-AS1Q8N8E1 139 aa11□□□□□ -0.65
CCDC144A-205ENST00000399264 IGHV4-30-2A0A087WSY4 118 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 K7ERJ3 54 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 IGKCP01834 107 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 GCSHP23434 173 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 SOCS3O14543 225 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 HSD52Q0P140 79 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 LAGE3Q14657 143 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 NEGR1Q7Z3B1 354 aa10.99□□□□□ -0.65
CCDC144A-205ENST00000399264 NF1P21359 2839 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 GAGE10A6NGK3 116 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 OR4X2Q8NGF9 303 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 C9orf118A6NHY6 69 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 SAP30O75446 220 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 SMIM15Q7Z3B0 74 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 HIF1ANQ9NWT6 349 aa10.98□□□□□ -0.65
CCDC144A-205ENST00000399264 ZNF462Q96JM2 2506 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 S100A4P26447 101 aaKnown RBP10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 OCIAD2Q56VL3 154 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 C9orf139Q6ZV77 190 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 RASL10AQ92737 203 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 MRPL53Q96EL3 112 aaKnown RBP10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 SETD2Q9BYW2 2564 aaPredicted RBP10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 TRBV25-1A0A075B6N4 114 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 NPFFR1Q9GZQ6 430 aa10.97□□□□□ -0.65
CCDC144A-205ENST00000399264 H3BRM9 83 aa10.96□□□□□ -0.65
CCDC144A-205ENST00000399264 DPM2O94777 84 aa10.96□□□□□ -0.65
CCDC144A-205ENST00000399264 RHPN1-AS1Q9BWJ2 59 aa10.96□□□□□ -0.65
CCDC144A-205ENST00000399264 JPT2Q9H910 190 aa10.96□□□□□ -0.65
CCDC144A-205ENST00000399264 NIPBLQ6KC79 2804 aaeCLIP10.96□□□□□ -0.66
CCDC144A-205ENST00000399264 IGHV4-4A0A075B6R2 117 aa10.96□□□□□ -0.66
CCDC144A-205ENST00000399264 MGPP08493 103 aa10.96□□□□□ -0.66
CCDC144A-205ENST00000399264 OR10J6PQ8NGY7 276 aa10.96□□□□□ -0.66
CCDC144A-205ENST00000399264 ZNF469Q96JG9 3925 aaPredicted RBP10.96□□□□□ -0.66
CCDC144A-205ENST00000399264 A6NDN8 102 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 MYOZ3Q8TDC0 251 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 PRORYQ9H606 182 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 NDUFA4O00483 81 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 IGHG2P01859 326 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 ATP5J2P56134 94 aa10.95□□□□□ -0.66
CCDC144A-205ENST00000399264 UFSP1Q6NVU6 142 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms