RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 RNASE4P34096 147 aaKnown RBP19.36■□□□□ 0.69
SHARPIN-202ENST00000398712 RNF185Q96GF1 192 aa19.36■□□□□ 0.69
SHARPIN-202ENST00000398712 ITPR3Q14573 2671 aa19.36■□□□□ 0.69
SHARPIN-202ENST00000398712 LINC01619G3V211 115 aa19.35■□□□□ 0.69
SHARPIN-202ENST00000398712 TFPI2P48307 235 aa19.35■□□□□ 0.69
SHARPIN-202ENST00000398712 CTAG1AP78358 180 aa19.35■□□□□ 0.69
SHARPIN-202ENST00000398712 KRTAP1-1Q07627 177 aa19.35■□□□□ 0.69
SHARPIN-202ENST00000398712 OR10AG1Q8NH19 301 aa19.35■□□□□ 0.69
SHARPIN-202ENST00000398712 NOTCH2Q04721 2471 aa19.35■□□□□ 0.69
SHARPIN-202ENST00000398712 Q6ZSV7 163 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 YAE1D1Q9NRH1 226 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 SPANXN1Q5VSR9 72 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 C20orf144Q9BQM9 153 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 TMEM70Q9BUB7 260 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 SIGLEC8Q9NYZ4 499 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 LAMTOR2Q9Y2Q5 125 aa19.34■□□□□ 0.69
SHARPIN-202ENST00000398712 ZNF688P0C7X2 276 aa19.33■□□□□ 0.68
SHARPIN-202ENST00000398712 TDRG1Q3Y452 100 aa19.33■□□□□ 0.68
SHARPIN-202ENST00000398712 PSMG4Q5JS54 123 aa19.33■□□□□ 0.68
SHARPIN-202ENST00000398712 HSPB8Q9UJY1 196 aa19.33■□□□□ 0.68
SHARPIN-202ENST00000398712 KLLNB2CW77 178 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 H3BVH4 76 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 IFI27P40305 119 aaPredicted RBP19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 ASIPP42127 132 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 SLURP1P55000 103 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 C18orf65Q6ZTR6 163 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 DPF1Q92782 380 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 ODF3Q96PU9 254 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 NDUFAF3Q9BU61 184 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 PAM16Q9Y3D7 125 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 MED14OSP0DP75 135 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 DEFB136Q30KP8 78 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 TCTEX1D4Q5JR98 221 aa19.32■□□□□ 0.68
SHARPIN-202ENST00000398712 LOC389332A0A1B0GUA5 103 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 SMKR1H3BMG3 65 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 NPYP01303 97 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 ANXA2RQ3ZCQ2 193 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 KHDC1LQ5JSQ8 128 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 C14orf144Q96I85 54 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 PEMTQ9UBM1 199 aa19.31■□□□□ 0.68
SHARPIN-202ENST00000398712 TCF21O43680 179 aa19.3■□□□□ 0.68
SHARPIN-202ENST00000398712 NCR2O95944 276 aa19.3■□□□□ 0.68
SHARPIN-202ENST00000398712 S100A4P26447 101 aaKnown RBP19.3■□□□□ 0.68
SHARPIN-202ENST00000398712 LEPP41159 167 aa19.3■□□□□ 0.68
SHARPIN-202ENST00000398712 SCGB2A2Q13296 93 aa19.3■□□□□ 0.68
SHARPIN-202ENST00000398712 OR11H1Q8NG94 326 aa19.3■□□□□ 0.68
SHARPIN-202ENST00000398712 A0A0J9YX75 114 aa19.29■□□□□ 0.68
SHARPIN-202ENST00000398712 OR1N2Q8NGR9 330 aa19.29■□□□□ 0.68
SHARPIN-202ENST00000398712 CRXO43186 299 aaPredicted RBP19.29■□□□□ 0.68
SHARPIN-202ENST00000398712 MAP1LC3AQ9H492 121 aa19.29■□□□□ 0.68
SHARPIN-202ENST00000398712 WFDC12Q8WWY7 111 aa19.28■□□□□ 0.68
SHARPIN-202ENST00000398712 MAP1LC3CQ9BXW4 147 aa19.28■□□□□ 0.68
SHARPIN-202ENST00000398712 ESM1Q9NQ30 184 aa19.28■□□□□ 0.68
SHARPIN-202ENST00000398712 SYS1-DBNDD2H3BUS1 97 aa19.27■□□□□ 0.68
SHARPIN-202ENST00000398712 EVI2AP22794 236 aa19.27■□□□□ 0.68
SHARPIN-202ENST00000398712 KIR3DS1Q14943 382 aa19.27■□□□□ 0.68
SHARPIN-202ENST00000398712 KLHL30-AS1Q8NEE0 82 aa19.27■□□□□ 0.68
SHARPIN-202ENST00000398712 TIMM8BQ9Y5J9 83 aaPredicted RBP19.27■□□□□ 0.68
SHARPIN-202ENST00000398712 PDZD2O15018 2839 aa19.27■□□□□ 0.68
SHARPIN-202ENST00000398712 C20orf202A1L168 122 aa19.27■□□□□ 0.67
SHARPIN-202ENST00000398712 ADAMTSL5Q6ZMM2 481 aa19.27■□□□□ 0.67
SHARPIN-202ENST00000398712 LINC00173Q6ZV60 143 aa19.27■□□□□ 0.67
SHARPIN-202ENST00000398712 DUSP14O95147 198 aaKnown RBP19.26■□□□□ 0.67
SHARPIN-202ENST00000398712 OR9G4Q8NGQ1 327 aa19.26■□□□□ 0.67
SHARPIN-202ENST00000398712 SPATA45Q537H7 98 aa19.25■□□□□ 0.67
SHARPIN-202ENST00000398712 PHLDA3Q9Y5J5 127 aa19.25■□□□□ 0.67
SHARPIN-202ENST00000398712 TNFRSF6BO95407 300 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 SCRT2Q9NQ03 307 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 C7orf71A4D174 169 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 PET117Q6UWS5 81 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 FAM159AQ6UWV7 190 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 FOXI2Q6ZQN5 318 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 MIEN1Q9BRT3 115 aa19.24■□□□□ 0.67
SHARPIN-202ENST00000398712 TRAV2A0A0B4J234 112 aa19.23■□□□□ 0.67
SHARPIN-202ENST00000398712 TSPOP30536 169 aa19.23■□□□□ 0.67
SHARPIN-202ENST00000398712 NXT2Q9NPJ8 142 aaKnown RBP19.23■□□□□ 0.67
SHARPIN-202ENST00000398712 ZNF469Q96JG9 3925 aaPredicted RBP19.22■□□□□ 0.67
SHARPIN-202ENST00000398712 M0R381 172 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 GNRH2O43555 120 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 RNASE1P07998 156 aaKnown RBP19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 SPATA12Q7Z6I5 190 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 ATOH7Q8N100 152 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 ZNF747Q9BV97 191 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 FLNAP21333 2647 aaKnown RBP19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 LINC01546A6NGU7 62 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 ZNF705AQ6ZN79 300 aaPredicted RBP19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 DLX4Q92988 240 aaPredicted RBP19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 MRAP2Q96G30 205 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 DUX3Q96PT4 197 aa19.21■□□□□ 0.67
SHARPIN-202ENST00000398712 TRAV9-2A0A087WT02 112 aa19.2■□□□□ 0.66
SHARPIN-202ENST00000398712 HBDP02042 147 aa19.2■□□□□ 0.66
SHARPIN-202ENST00000398712 RNASE3P12724 160 aaKnown RBP19.2■□□□□ 0.66
SHARPIN-202ENST00000398712 OR2K2Q8NGT1 345 aa19.2■□□□□ 0.66
SHARPIN-202ENST00000398712 CCDC168Q8NDH2 2452 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 A0A096LNJ9 63 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 TRAV12-3A0A0B4J271 114 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 GAS8-AS1O95177 125 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 TMEM160Q9NX00 188 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 OR4C46A6NHA9 309 aa19.19■□□□□ 0.66
SHARPIN-202ENST00000398712 CDKN1BP46527 198 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms