RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 BUB3O43684 328 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 PAX2Q02962 417 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 CHAC1Q9BUX1 264 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 SCGB1A1P11684 91 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 LINC00158P58513 81 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 HOXD3P31249 432 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 NAA38Q9BRA0 125 aaKnown RBP11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 I3L3M4 83 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 ESDP10768 282 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 SIRPDQ9H106 197 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 F6UB75 175 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 M0R2P5 195 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 EREGO14944 169 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 NAV3Q8IVL0 2385 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 KIR3DS1Q14943 382 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
PCDHGA11-201ENST00000398587 SRSF2Q01130 221 aaKnown RBP11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 KLF5Q13887 457 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 PMVKQ15126 192 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 MEGF9Q9H1U4 602 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 PCP4P48539 62 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 WI2-2373I1.2A0A1W2PRP0 233 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 PRB1P04280 392 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 IGLL1P15814 213 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 FOXE3Q13461 319 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 SPXQ9BT56 116 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 ARHGAP21Q5T5U3 1957 aa11.09□□□□□ -0.63
PCDHGA11-201ENST00000398587 CKS1BP61024 79 aa11.08□□□□□ -0.64
PCDHGA11-201ENST00000398587 KLF12Q9Y4X4 402 aa11.08□□□□□ -0.64
PCDHGA11-201ENST00000398587 GHRHP01286 108 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 CFHR4Q92496 578 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 FSTL3O95633 263 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 SNHG12Q9BXW3 62 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 MYO9AB2RTY4 2548 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 AZU1P20160 251 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 C16orf54Q6UWD8 224 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 ZNF295-AS1Q8N0V1 137 aa11.07□□□□□ -0.64
PCDHGA11-201ENST00000398587 IGHV3-16A0A0C4DH30 117 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE1Q13065 139 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE4Q13068 117 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE5Q13069 117 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 C3orf56Q8N813 242 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 ZNF48Q96MX3 618 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 F8VRH5 84 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 PRIMA1Q86XR5 153 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 FANCD2OSQ96PS1 177 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 UBE2V1Q13404 147 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 EIF4EBP1Q13541 118 aaPredicted RBP11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 UTF1Q5T230 341 aa11.06□□□□□ -0.64
PCDHGA11-201ENST00000398587 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 COX8AP10176 69 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 LRP4O75096 1905 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 CENPFP49454 3210 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 GNRH2O43555 120 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 LMO4P61968 165 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 SLC25A20O43772 301 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 IGHG2P01859 326 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 ZNF493Q6ZR52 646 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 NRGNQ92686 78 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 ZNF747Q9BV97 191 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 PLXNB1O43157 2135 aa11.05□□□□□ -0.64
PCDHGA11-201ENST00000398587 MTURNQ8N3F0 131 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 NEGR1Q7Z3B1 354 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 PAX4O43316 350 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 NPC2P61916 151 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 DSCAMO60469 2012 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 ATXN8Q156A1 80 aa11.04□□□□□ -0.64
PCDHGA11-201ENST00000398587 K7EMI3 77 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE7O76087 117 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
PCDHGA11-201ENST00000398587 SS18Q15532 418 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms