RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 PSMB2P49721 201 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 GTSCR1Q86UQ5 136 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 ORMDL3Q8N138 153 aa3.93□□□□□ -1.78
SSR1-202ENST00000397511 IGHV3-49A0A0A0MS15 119 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 PRSS1P07477 247 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 TWIST1Q15672 202 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 THAP8Q8NA92 274 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 TMEM158Q8WZ71 300 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 CARD19Q96LW7 228 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 POLQO75417 2590 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 WI2-2373I1.2A0A1W2PRP0 233 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 A8MWV9 139 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 DPM2O94777 84 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 IGKV1-17P01599 117 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 NBL1P41271 181 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 C3orf36Q3SXR2 165 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 LINC01559Q495D7 138 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 WFDC3Q8IUB2 231 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 Q8TAT8 98 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 C8orf49Q96NF6 230 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 TMEM126AQ9H061 195 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 ZMAT4Q9H898 229 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 HHLA3Q9XRX5 114 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 ZANQ9Y493 2812 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 CSPG4Q6UVK1 2322 aa3.92□□□□□ -1.78
SSR1-202ENST00000397511 LOC107984156A0A0G2JMH3 177 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 M0QXV9 152 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 HLA-DMBP28068 263 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 ASIPP42127 132 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 C5orf47Q569G3 176 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 ZC2HC1BQ5TFG8 222 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 Q86TA4 180 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 ARL17AQ8IVW1 177 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 TMEM75Q8N9X5 138 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 C1orf43Q9BWL3 253 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 U3KQK5 164 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 IGHV3OR16-10A0A075B7F0 116 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 IGKV2-40A0A087WW87 121 aaPredicted RBP3.91□□□□□ -1.78
SSR1-202ENST00000397511 ATP5LO75964 103 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 IGKV2D-40P01614 121 aaPredicted RBP3.91□□□□□ -1.78
SSR1-202ENST00000397511 ATP5J2P56134 94 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 MEIG1Q5JSS6 88 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 MORN3Q6PF18 240 aaPredicted RBP3.91□□□□□ -1.78
SSR1-202ENST00000397511 Q6Q795 121 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 FAM159AQ6UWV7 190 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 ZNF493Q6ZR52 646 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 DYNAPQ8N1N2 210 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 LINC00311Q8N616 119 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 PTH2Q96A98 100 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 LINC00527Q9UJ94 153 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 RAXQ9Y2V3 346 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 DOPEY2Q9Y3R5 2298 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 A8MZ25 164 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 I3L2K1 104 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 K7EIM0 57 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 IGHG4P01861 327 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 TMEM30BQ3MIR4 351 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 FAM104BQ5XKR9 115 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 TRGV9Q99603 122 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 PPDPFQ9H3Y8 114 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 KAAG1Q9UBP8 84 aa3.91□□□□□ -1.78
SSR1-202ENST00000397511 TRBV7-3A0A075B6L6 115 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 LINC01619G3V211 115 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 SMKR1H3BMG3 65 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 H3BVH4 76 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 CKS2P33552 79 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 NDPQ00604 133 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 PAX8Q06710 450 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 ECSCRQ19T08 205 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 ZNF491Q8N8L2 437 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 FOXC2Q99958 501 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 MYO18BQ8IUG5 2567 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 ZFYVE26Q68DK2 2539 aa3.9□□□□□ -1.78
SSR1-202ENST00000397511 CFAP46Q8IYW2 2715 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 TMEM213A2RRL7 107 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 NBR2O15453 112 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 IGLV2-11P01706 119 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 CRYGBP07316 175 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 MAPKAPK5-AS1Q8N8E1 139 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 AJUBAQ96IF1 538 aa3.9□□□□□ -1.79
SSR1-202ENST00000397511 USP9YO00507 2555 aaPredicted RBP3.9□□□□□ -1.79
SSR1-202ENST00000397511 CACNA1AO00555 2505 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 TRAV8-2A0A0B4J237 113 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 MYMXA0A1B0GTQ4 84 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 ZNF785A8K8V0 405 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 OVOL3O00110 214 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 LEPP41159 167 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 CRIP1P50238 77 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 LY6DQ14210 128 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 MRPL51Q4U2R6 128 aaKnown RBP3.89□□□□□ -1.79
SSR1-202ENST00000397511 AMN1Q8IY45 258 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 ANKRD29Q8N6D5 301 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 OR10J6PQ8NGY7 276 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 NRGNQ92686 78 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 VKORC1Q9BQB6 163 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 DPM3Q9P2X0 92 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 CSDC2Q9Y534 153 aaKnown RBP3.89□□□□□ -1.79
SSR1-202ENST00000397511 TRBV19A0A075B6N1 114 aa3.89□□□□□ -1.79
SSR1-202ENST00000397511 TRAV4A0A0B4J268 109 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms