RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 C2orf50Q96LR7 162 aa5.89□□□□□ -1.47
CAPN3-208ENST00000397204 LYRM2Q9NU23 88 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-208ENST00000397204 IGKV2-40A0A087WW87 121 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-208ENST00000397204 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 C5orf51A6NDU8 294 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 CCDC160A6NGH7 325 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 C9JCJ5 164 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 CCSO14618 274 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 PSCAO43653 123 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 IGKV2D-40P01614 121 aaPredicted RBP5.88□□□□□ -1.47
CAPN3-208ENST00000397204 C1QBP02746 253 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 FGF7P21781 194 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 IL15RAQ13261 267 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 PRR9Q5T870 116 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 FAM122CQ6P4D5 195 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 STX12Q86Y82 276 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 FAM167A-AS1Q96KT0 104 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 OR51M1Q9H341 326 aa5.88□□□□□ -1.47
CAPN3-208ENST00000397204 IGHV3-38A0A0C4DH36 116 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 UBE2L5PA0A1B0GUS4 154 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 IGSF23A1L1A6 192 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 RBAKDNA6NC62 111 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 LRCOL1A6NCL2 159 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 IBA57-AS1B1ANH7 110 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 SFTA3P0C7M3 94 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 CSN1S1P47710 185 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 GCSAMLQ5JQS6 135 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 Q6AWC8 147 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 FAM159AQ6UWV7 190 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 SDHCQ99643 169 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-208ENST00000397204 SLC25A2Q9BXI2 301 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 LENEPQ9Y5L5 61 aa5.87□□□□□ -1.47
CAPN3-208ENST00000397204 TRGV11A0A075B6L2 103 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 TRAV4A0A0B4J268 109 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 TCRBP04435 133 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 S100A9P06702 114 aaKnown RBP5.86□□□□□ -1.47
CAPN3-208ENST00000397204 PFN1P07737 140 aaKnown RBP5.86□□□□□ -1.47
CAPN3-208ENST00000397204 TMEM183BQ1AE95 376 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 TDRG1Q3Y452 100 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 LINC01556Q5JQF7 62 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 MUC21Q5SSG8 566 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 MIR17HGQ75NE6 70 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 TMEM183AQ8IXX5 376 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 OR4C5Q8NGB2 326 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 FXYD5Q96DB9 178 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 NPCDR1Q9BY65 106 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 SLC25A31Q9H0C2 315 aa5.86□□□□□ -1.47
CAPN3-208ENST00000397204 M0R2P5 195 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 PLA2G10O15496 165 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 CIDEAO60543 219 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 IL7P13232 177 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 S100A10P60903 97 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 SSTP61278 116 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 RANP62826 216 aaKnown RBP5.85□□□□□ -1.47
CAPN3-208ENST00000397204 RAB32Q13637 225 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 Q8N814 137 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 Q8TAT8 98 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 MBD2Q9UBB5 411 aa5.85□□□□□ -1.47
CAPN3-208ENST00000397204 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-208ENST00000397204 LYRM1O43325 122 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 OR10J4P0C629 311 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 GATA1P15976 413 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-208ENST00000397204 HAMPP81172 84 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 NHLH2Q02577 135 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 NHLRC2Q8NBF2 726 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 SEC22CQ9BRL7 303 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 TM2D2Q9BX73 214 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 RBM38Q9H0Z9 239 aaKnown RBP5.84□□□□□ -1.47
CAPN3-208ENST00000397204 KCNIP2Q9NS61 270 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
CAPN3-208ENST00000397204 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
CAPN3-208ENST00000397204 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 DIRC3C9JPN6 131 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 GNRH2O43555 120 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 OR7C2O60412 319 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 PPT1P50897 306 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 ZNF674Q2M3X9 581 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 OR10J3Q5JRS4 329 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 OR5C1Q8NGR4 320 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 THAP6Q8TBB0 222 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 DEFB104AQ8WTQ1 72 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 PHYHIPLQ96FC7 376 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 KCNS1Q96KK3 526 aa5.83□□□□□ -1.48
CAPN3-208ENST00000397204 TRAV21A0A0B4J279 112 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 IGHV3-16A0A0C4DH30 117 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 LOC100131303A0A0U1RQF7 123 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 TRBV6-4A0A1B0GX49 114 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 PGPEP1LA6NFU8 196 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 C17orf112F2Z3M2 114 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 LAGE3Q14657 143 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 LELP1Q5T871 98 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 ATP5SQ99766 215 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 WDR61Q9GZS3 305 aaKnown RBP5.82□□□□□ -1.48
CAPN3-208ENST00000397204 SH3BGRL3Q9H299 93 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms