RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 PCNX1Q96RV3 2341 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 TRAV4A0A0B4J268 109 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 BRI3O95415 125 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 IGKV3-15P01624 115 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 ZFP2Q6ZN57 461 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 C15orf53Q8NAA6 179 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 TIMD4Q96H15 378 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 SCGB3A1Q96QR1 104 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 KIR2DL4Q99706 377 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 FZR1Q9UM11 496 aa7.71□□□□□ -1.18
APTX-207ENST00000397172 INTS1Q8N201 2190 aaKnown RBP7.71□□□□□ -1.18
APTX-207ENST00000397172 IGHV3OR15-7A0A075B7D8 119 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
APTX-207ENST00000397172 C9JAW5 83 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 J3KT08 172 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 WIPF1O43516 503 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 DUSP14O95147 198 aaKnown RBP7.7□□□□□ -1.18
APTX-207ENST00000397172 SPRNQ5BIV9 151 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 Q6ZT83 130 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 RNASE6Q93091 150 aaKnown RBP7.7□□□□□ -1.18
APTX-207ENST00000397172 PRADC1Q9BSG0 188 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 DOPEY1Q5JWR5 2465 aa7.7□□□□□ -1.18
APTX-207ENST00000397172 FLNCQ14315 2725 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 A0A1B0GX51 115 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 H3BMM0 161 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 PPP1R17O96001 155 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 ORM1P02763 201 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 ACYP1P07311 99 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 CD7P09564 240 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 CDSNQ15517 529 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 ZNF474Q6S9Z5 364 aaPredicted RBP7.69□□□□□ -1.18
APTX-207ENST00000397172 UBE2WQ96B02 151 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 C8orf49Q96NF6 230 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 PRR25Q96S07 402 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 ASCL2Q99929 193 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 MRPL36Q9P0J6 103 aaKnown RBP7.69□□□□□ -1.18
APTX-207ENST00000397172 RNF7Q9UBF6 113 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 USP9XQ93008 2570 aaPredicted RBP7.69□□□□□ -1.18
APTX-207ENST00000397172 IGLV2-18A0A075B6J9 118 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 LHBP01229 141 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 IGHV3-48P01763 117 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 IGHV1-2P23083 117 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 IL17RELQ6ZVW7 336 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 LINC00311Q8N616 119 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 RASL10AQ92737 203 aa7.69□□□□□ -1.18
APTX-207ENST00000397172 CSDC2Q9Y534 153 aaKnown RBP7.69□□□□□ -1.18
APTX-207ENST00000397172 FASNP49327 2511 aaKnown RBP7.68□□□□□ -1.18
APTX-207ENST00000397172 DYSFO75923 2080 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 TRBV7-7A0A0K0K1E9 115 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 TRBV10-2A0A0K0K1G8 114 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 CGB1A6NKQ9 187 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 EGR2P11161 476 aaPredicted RBP7.68□□□□□ -1.18
APTX-207ENST00000397172 RPL7P18124 248 aaKnown RBP7.68□□□□□ -1.18
APTX-207ENST00000397172 ID1P41134 155 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 HCP5Q6MZN7 132 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 Q8N1Y9 231 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 SIGLEC9Q9Y336 463 aa7.68□□□□□ -1.18
APTX-207ENST00000397172 A0A0B4J2C4 111 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 COX6CP09669 75 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 GATA4P43694 442 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 ANXA2RQ3ZCQ2 193 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 DTX2Q86UW9 622 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 TENM4Q6N022 2769 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 CACNA1DQ01668 2161 aa7.67□□□□□ -1.18
APTX-207ENST00000397172 SPTBN1Q01082 2364 aaKnown RBP7.67□□□□□ -1.18
APTX-207ENST00000397172 H3BT86 120 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 M0R2P5 195 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 LGALS9O00182 355 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 LYZL6O75951 148 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 IGLV2-23P01705 113 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 CFC1BP0CG36 223 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 CFC1P0CG37 223 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 RPS28P62857 69 aaKnown RBP7.66□□□□□ -1.18
APTX-207ENST00000397172 FAM27E3Q08E93 113 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 NTN5Q8WTR8 489 aaPredicted RBP7.66□□□□□ -1.18
APTX-207ENST00000397172 RNF125Q96EQ8 232 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 GCN1Q92616 2671 aaKnown RBP7.66□□□□□ -1.18
APTX-207ENST00000397172 LRRK2Q5S007 2527 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 E7EUB6 86 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 TIMM23O14925 209 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 UQCRQO14949 82 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 TMEM155Q4W5P6 130 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 C10orf55Q5SWW7 151 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 C9orf153Q5TBE3 101 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 Q71RC1 249 aaPredicted RBP7.66□□□□□ -1.18
APTX-207ENST00000397172 SMIM2Q9BVW6 85 aa7.66□□□□□ -1.18
APTX-207ENST00000397172 COL12A1Q99715 3063 aa7.65□□□□□ -1.18
APTX-207ENST00000397172 FREM1Q5H8C1 2179 aa7.65□□□□□ -1.18
APTX-207ENST00000397172 IGHV1-69DA0A0B4J2H0 117 aa7.65□□□□□ -1.18
APTX-207ENST00000397172 CECR9P0C854 216 aa7.65□□□□□ -1.18
APTX-207ENST00000397172 Q1RN00 199 aa7.65□□□□□ -1.18
APTX-207ENST00000397172 UTF1Q5T230 341 aa7.65□□□□□ -1.18
APTX-207ENST00000397172 C3orf22Q8N5N4 141 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms